RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 ACTR3P61158 418 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 TAF10Q12962 218 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 SLC12A1Q13621 1099 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 PTPRCAPQ14761 206 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 TRIP4Q15650 581 aaPredicted RBP7.08□□□□□ -1.28
SNX25-202ENST00000504273 TBCCQ15814 346 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 SLC14A2Q15849 920 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 CMPK2Q5EBM0 449 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 SIRPB2Q5JXA9 342 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 FAM171A1Q5VUB5 890 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 LIPMQ5VYY2 423 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 TIGD7Q6NT04 549 aaPredicted RBP7.08□□□□□ -1.28
SNX25-202ENST00000504273 NET1Q7Z628 596 aaPredicted RBP7.08□□□□□ -1.28
SNX25-202ENST00000504273 DCP1BQ8IZD4 617 aaKnown RBP7.08□□□□□ -1.28
SNX25-202ENST00000504273 EFCAB3Q8N7B9 438 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 KDM1BQ8NB78 822 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 PHC3Q8NDX5 983 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 CFAP61Q8NHU2 1237 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 AGR3Q8TD06 166 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 PTCD2Q8WV60 388 aaKnown RBP7.08□□□□□ -1.28
SNX25-202ENST00000504273 HEXDCQ8WVB3 486 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 FAM136AQ96C01 138 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 ZYG11BQ9C0D3 744 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 IL23AQ9NPF7 189 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 VPS45Q9NRW7 570 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 NMRK1Q9NWW6 199 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 FNIP2Q9P278 1114 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 MARCH4Q9P2E8 410 aaPredicted RBP7.08□□□□□ -1.28
SNX25-202ENST00000504273 STX18Q9P2W9 335 aaKnown RBP7.08□□□□□ -1.28
SNX25-202ENST00000504273 FBXO5Q9UKT4 447 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 PCDHB5Q9Y5E4 795 aa7.08□□□□□ -1.28
SNX25-202ENST00000504273 NEMP2A6NFY4 417 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 OR51F1A6NGY5 319 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 TMEM233B4DJY2 109 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 H3BNC9 293 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 AP3B1O00203 1094 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 SYN3O14994 580 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 GALR2O43603 387 aaPredicted RBP7.07□□□□□ -1.28
SNX25-202ENST00000504273 CABYRO75952 493 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 KLHL2O95198 593 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 HADHAP40939 763 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 LEPRP48357 1165 aaKnown RBP7.07□□□□□ -1.28
SNX25-202ENST00000504273 NAGLUP54802 743 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 KLF10Q13118 480 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 CCNIQ14094 377 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 SEMA3AQ14563 771 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 CTXN3Q4LDR2 81 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 SNX30Q5VWJ9 437 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 PTCRAQ6ISU1 281 aaPredicted RBP7.07□□□□□ -1.28
SNX25-202ENST00000504273 ANO7Q6IWH7 933 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 TRIM67Q6ZTA4 783 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 RPS27LQ71UM5 84 aaKnown RBP7.07□□□□□ -1.28
SNX25-202ENST00000504273 LDB1Q86U70 411 aaPredicted RBP7.07□□□□□ -1.28
SNX25-202ENST00000504273 PPHLN1Q8NEY8 458 aaKnown RBP7.07□□□□□ -1.28
SNX25-202ENST00000504273 HMGCLL1Q8TB92 370 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 RDH11Q8TC12 318 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 DTX3LQ8TDB6 740 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 NDNQ99608 321 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 TSEN34Q9BSV6 310 aaKnown RBP7.07□□□□□ -1.28
SNX25-202ENST00000504273 VN1R3Q9BXE9 311 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 TMEM161AQ9NX61 479 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 XPR1Q9UBH6 696 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 APOBEC2Q9Y235 224 aaKnown RBP7.07□□□□□ -1.28
SNX25-202ENST00000504273 MICAL3Q7RTP6 2002 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 CACNA1GO43497 2377 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 hCG_2014768A0A024R1R8 64 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 GOLGA8QA0A0J9YX86 632 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 GOLGA8OA6NCC3 632 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 NT5C1B-RDH14C9J2C7 533 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 E9PBE3 544 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 F8W8V4 182 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 GOLGA8NF8WBI6 632 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 KLHL41O60662 606 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 TADA2AO75478 443 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 PIGNO95427 931 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 S1PR4O95977 384 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 HMBSP08397 361 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 COL6A2P12110 1019 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 TFEBP19484 476 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 FUT4P22083 530 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 DNAJB1P25685 340 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 CDKN2DP55273 166 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 SLC34A1Q06495 639 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 SERINC3Q13530 473 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 PDCD2Q16342 344 aaPredicted RBP7.07□□□□□ -1.28
SNX25-202ENST00000504273 SLC5A9Q2M3M2 681 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 LSM12Q3MHD2 195 aaKnown RBP7.07□□□□□ -1.28
SNX25-202ENST00000504273 C5orf22Q49AR2 442 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 PPM1LQ5SGD2 360 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 ZNF470Q6ECI4 717 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 ZNF549Q6P9A3 640 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 CYHR1Q6ZMK1 362 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 RNF180Q86T96 592 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 MIB1Q86YT6 1006 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 LRRC49Q8IUZ0 686 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 MCUR1Q96AQ8 359 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 NAF1Q96HR8 494 aaKnown RBP7.07□□□□□ -1.28
SNX25-202ENST00000504273 UBXN10Q96LJ8 280 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 FBXO44Q9H4M3 255 aa7.07□□□□□ -1.28
SNX25-202ENST00000504273 NSMCE4AQ9NXX6 385 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms