RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 TMEM160Q9NX00 188 aa2.53□□□□□ -2
SMAD1-203ENST00000502342 DONSONQ9NYP3 566 aa2.53□□□□□ -2
SMAD1-203ENST00000502342 RRN3Q9NYV6 651 aa2.53□□□□□ -2
SMAD1-203ENST00000502342 GGA3Q9NZ52 723 aa2.53□□□□□ -2
SMAD1-203ENST00000502342 SMARCAL1Q9NZC9 954 aa2.53□□□□□ -2
SMAD1-203ENST00000502342 HCN3Q9P1Z3 774 aa2.53□□□□□ -2
SMAD1-203ENST00000502342 NFE2L3Q9Y4A8 694 aa2.53□□□□□ -2
SMAD1-203ENST00000502342 LSM4Q9Y4Z0 139 aaKnown RBP2.53□□□□□ -2
SMAD1-203ENST00000502342 PCDHAC2Q9Y5I4 1007 aa2.53□□□□□ -2
SMAD1-203ENST00000502342 A0A0U1RQF3 1178 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 RRN3P2A6NIE6 340 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 PRAC2D3DTV9 90 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 NPIPB11E5RHQ5 1161 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 SNAP23O00161 211 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 KLK8O60259 260 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 TIPRLO75663 272 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 GAGE7O76087 117 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 KDM4BO94953 1096 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 PMS2P2O95744 297 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 MT-CYBP00156 380 aaPredicted RBP2.52□□□□□ -2.01
SMAD1-203ENST00000502342 IGKV3-20P01619 116 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 HEXAP06865 529 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 MMP2P08253 660 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 F7P08709 466 aaPredicted RBP2.52□□□□□ -2.01
SMAD1-203ENST00000502342 GAGE12FP0CL80 117 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 GAGE12GP0CL81 117 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 GAGE12IP0CL82 117 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 G6PDP11413 515 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 XBP1P17861 261 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 CHATP28329 748 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 DDIT3P35638 169 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 GNAQP50148 359 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 TLE2Q04725 743 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 GRIK3Q13003 919 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 GAGE1Q13065 139 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 GAGE4Q13068 117 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 DHX8Q14562 1220 aaKnown RBP2.52□□□□□ -2.01
SMAD1-203ENST00000502342 GPR68Q15743 365 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 TCTN1Q2MV58 587 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 MMEL1Q495T6 779 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 ZNF628Q5EBL2 1059 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 FAM69BQ5VUD6 431 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 WBP2NLQ6ICG8 309 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 UNQ6126/PRO20091Q6UXV3 157 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 KRBA2Q6ZNG9 492 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 SFR1Q86XK3 245 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 DHX40Q8IX18 779 aaKnown RBP2.52□□□□□ -2.01
SMAD1-203ENST00000502342 SMAP1Q8IYB5 467 aaPredicted RBP2.52□□□□□ -2.01
SMAD1-203ENST00000502342 DSELQ8IZU8 1212 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 MAB21L3Q8N8X9 362 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 SCCPDHQ8NBX0 429 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 AGBL3Q8NEM8 1001 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 MYRIPQ8NFW9 859 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 SPATA3Q8NHX4 192 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 SNAPC3Q92966 411 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 CD101Q93033 1021 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 ZBTB10Q96DT7 871 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 NDST4Q9H3R1 872 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 ZNF556Q9HAH1 456 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 MAGEE1Q9HCI5 957 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 GPR108Q9NPR9 543 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 TCF7L2Q9NQB0 619 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 CNGB3Q9NQW8 809 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 C20orf141Q9NUB4 165 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 LUZP4Q9P127 313 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 MDFICQ9P1T7 246 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 FBXO9Q9UK97 447 aaPredicted RBP2.52□□□□□ -2.01
SMAD1-203ENST00000502342 TBX20Q9UMR3 447 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 VDAC3Q9Y277 283 aa2.52□□□□□ -2.01
SMAD1-203ENST00000502342 A0A087WYN8 130 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 A0A0G2JPF8 293 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 GAGE10A6NGK3 116 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 TTC36A6NLP5 189 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 HNRNPCL3B7ZW38 293 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 TULP2O00295 520 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 SOCS6O14544 535 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 WNT9BO14905 357 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 HNRNPCL1O60812 293 aaKnown RBP2.51□□□□□ -2.01
SMAD1-203ENST00000502342 NDUFS7O75251 213 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 KRT36O76013 467 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 TFP02787 698 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 HNRNPA1P09651 372 aaKnown RBP eCLIP2.51□□□□□ -2.01
SMAD1-203ENST00000502342 HNRNPCL4P0DMR1 293 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 SRCP12931 536 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 ITGAXP20702 1163 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 HNRNPH1P31943 449 aaKnown RBP2.51□□□□□ -2.01
SMAD1-203ENST00000502342 IL15P40933 162 aaPredicted RBP2.51□□□□□ -2.01
SMAD1-203ENST00000502342 NLRP5P59047 1200 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 SORDQ00796 357 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 ECT2LQ008S8 904 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 ACSM2AQ08AH3 577 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 ZNF155Q12901 538 aaPredicted RBP2.51□□□□□ -2.01
SMAD1-203ENST00000502342 TNFAIP1Q13829 316 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 EFNB3Q15768 340 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 C2orf68Q2NKX9 166 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 ATP13A5Q4VNC0 1218 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 SETMARQ53H47 684 aaPredicted RBP2.51□□□□□ -2.01
SMAD1-203ENST00000502342 FAM69AQ5T7M9 428 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 IRAK1BP1Q5VVH5 260 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 NAA35Q5VZE5 725 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms