RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 SUN1O94901 812 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 RNF224P0DH78 156 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 TCP1P17987 556 aaKnown RBP9.4□□□□□ -0.91
RPSA-209ENST00000495394 NFKB1P19838 968 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 CHMP24386 653 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 TIE1P35590 1138 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 TALDO1P37837 337 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 SUCLG1P53597 346 aaKnown RBP9.4□□□□□ -0.91
RPSA-209ENST00000495394 GHRHRQ02643 423 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 UBE3AQ05086 875 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 BTKQ06187 659 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 IL24Q13007 206 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 LLGL1Q15334 1064 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 C5orf46Q6UWT4 87 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 RRAGAQ7L523 313 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 FRMD5Q7Z6J6 570 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 ZNF781Q8N8C0 355 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 HPS1Q92902 700 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 TAMM41Q96BW9 452 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 NSUN4Q96CB9 384 aaKnown RBP9.4□□□□□ -0.91
RPSA-209ENST00000495394 AHCYL2Q96HN2 611 aaKnown RBP9.4□□□□□ -0.91
RPSA-209ENST00000495394 CITED2Q99967 270 aaPredicted RBP9.4□□□□□ -0.91
RPSA-209ENST00000495394 MCMBPQ9BTE3 642 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 ADGRE3Q9BY15 652 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 SLC22A4Q9H015 551 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 IL26Q9NPH9 171 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 TMEM39AQ9NV64 488 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 TMEM184CQ9NVA4 438 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 USP18Q9UMW8 372 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 SLC6A14Q9UN76 642 aa9.4□□□□□ -0.91
RPSA-209ENST00000495394 BCLAF3A2AJT9 711 aaKnown RBP9.39□□□□□ -0.91
RPSA-209ENST00000495394 C5orf51A6NDU8 294 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 TCP11X1B4DZS4 312 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 C6orf229H3BNL8 230 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 DENRO43583 198 aaKnown RBP9.39□□□□□ -0.91
RPSA-209ENST00000495394 VPS4BO75351 444 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 CYC1P08574 325 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 CCDC130P13994 396 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 NCF2P19878 526 aaPredicted RBP9.39□□□□□ -0.91
RPSA-209ENST00000495394 SLC1A4P43007 532 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 NT5C2P49902 561 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 CDH4P55283 916 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 HTRA3P83110 453 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 YWHAHQ04917 246 aaPredicted RBP9.39□□□□□ -0.91
RPSA-209ENST00000495394 SURF1Q15526 300 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 LCN1P1Q5VSP4 162 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 NFRKBQ6P4R8 1299 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 METAP1DQ6UB28 335 aaPredicted RBP9.39□□□□□ -0.91
RPSA-209ENST00000495394 SLC16A12Q6ZSM3 486 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 ERMP1Q7Z2K6 904 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 HERC6Q8IVU3 1022 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 CHERPQ8IWX8 916 aaKnown RBP9.39□□□□□ -0.91
RPSA-209ENST00000495394 FIBCD1Q8N539 461 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 VGLL2Q8N8G2 317 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 LEMD2Q8NC56 503 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 TBC1D16Q8TBP0 767 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 SNX29Q8TEQ0 813 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 CREB3L4Q8TEY5 395 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 HTRA1Q92743 480 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 HEXIM2Q96MH2 286 aaKnown RBP9.39□□□□□ -0.91
RPSA-209ENST00000495394 C7orf26Q96N11 449 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 CCNL2Q96S94 520 aaPredicted RBP9.39□□□□□ -0.91
RPSA-209ENST00000495394 SLC9A7Q96T83 725 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 C17orf80Q9BSJ5 609 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 ZSCAN5AQ9BUG6 496 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 SEMA6BQ9H3T3 888 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 KCNH7Q9NS40 1196 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 C19orf12Q9NSK7 152 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 PLCXD1Q9NUJ7 323 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 TAS2R10Q9NYW0 307 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 TJP2Q9UDY2 1190 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 SLC13A4Q9UKG4 626 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 WBP11Q9Y2W2 641 aaKnown RBP9.39□□□□□ -0.91
RPSA-209ENST00000495394 MRPS2Q9Y399 296 aaKnown RBP9.39□□□□□ -0.91
RPSA-209ENST00000495394 LAMA4Q16363 1823 aa9.39□□□□□ -0.91
RPSA-209ENST00000495394 MEX3AA1L020 520 aaKnown RBP9.38□□□□□ -0.91
RPSA-209ENST00000495394 ARHGEF35A5YM69 484 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 FAM172BPA6NC97 362 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 SMAD9O15198 467 aaKnown RBP9.38□□□□□ -0.91
RPSA-209ENST00000495394 SYF2O95926 243 aaKnown RBP9.38□□□□□ -0.91
RPSA-209ENST00000495394 SRCP12931 536 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 PKMP14618 531 aaKnown RBP9.38□□□□□ -0.91
RPSA-209ENST00000495394 MAGEA1P43355 309 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 SOX9P48436 509 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 TIMM10P62072 90 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 UBE2HP62256 183 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 PRKCQQ04759 706 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 GAD2Q05329 585 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 PCDH1Q08174 1060 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 DSC1Q08554 894 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 GPM6BQ13491 265 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 TIGD7Q6NT04 549 aaPredicted RBP9.38□□□□□ -0.91
RPSA-209ENST00000495394 KCNT2Q6UVM3 1135 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 B3GNT9Q6UX72 402 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 THAP5Q7Z6K1 395 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 HIPK1Q86Z02 1210 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 CMIPQ8IY22 773 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 FAM156AQ8NDB6 213 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 BBS10Q8TAM1 723 aa9.38□□□□□ -0.91
RPSA-209ENST00000495394 FAM174AQ8TBP5 190 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms