RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 FZD1Q9UP38 647 aa4.57□□□□□ -1.68
GTF3A-208ENST00000493903 MAU2Q9Y6X3 613 aa4.57□□□□□ -1.68
GTF3A-208ENST00000493903 ZNF608Q9ULD9 1512 aaPredicted RBP4.56□□□□□ -1.68
GTF3A-208ENST00000493903 FNDC1Q4ZHG4 1894 aaPredicted RBP4.56□□□□□ -1.68
GTF3A-208ENST00000493903 TRAV34A0A0B4J273 112 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 A0A0U1RQK1 487 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 ZNF320A2RRD8 509 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 CCDC188H7C350 402 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 K7ESM1 405 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 SIX3O95343 332 aaPredicted RBP4.56□□□□□ -1.68
GTF3A-208ENST00000493903 MT-ND3P03897 115 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 C6P13671 934 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 EPHB2P29323 1055 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 CHRNA5P30532 468 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 IDUAP35475 653 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 CCR10P46092 362 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 RAB28P51157 221 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 CLDN2P57739 230 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 BPIFB3P59826 476 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 SLC18A2Q05940 514 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 KCNC3Q14003 757 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 TNIP1Q15025 636 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 PFKFB3Q16875 520 aaPredicted RBP4.56□□□□□ -1.68
GTF3A-208ENST00000493903 ZNF674Q2M3X9 581 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 TYSND1Q2T9J0 566 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 C2orf76Q3KRA6 126 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 IGSF11Q5DX21 431 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 RARS2Q5T160 578 aaKnown RBP4.56□□□□□ -1.68
GTF3A-208ENST00000493903 ARMC4Q5T2S8 1044 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 ZNF449Q6P9G9 518 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 TMEM65Q6PI78 240 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 SUSD1Q6UWL2 747 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 MSANTD1Q6ZTZ1 278 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 TDRPQ86YL5 185 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 C10orf53Q8N6V4 93 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 SPC24Q8NBT2 197 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 OR4N2Q8NGD1 307 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 ASB10Q8WXI3 467 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 PTERQ96BW5 349 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 ERO1AQ96HE7 468 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 Q96MF0 132 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 ADOQ96SZ5 270 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 FUT8Q9BYC5 575 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 FRMD8Q9BZ67 464 aaPredicted RBP4.56□□□□□ -1.68
GTF3A-208ENST00000493903 PARPBPQ9NWS1 579 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 ASIC5Q9NY37 505 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 COPG2Q9UBF2 871 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 CRNNQ9UBG3 495 aaPredicted RBP4.56□□□□□ -1.68
GTF3A-208ENST00000493903 DNAJB9Q9UBS3 223 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 UBA2Q9UBT2 640 aaPredicted RBP4.56□□□□□ -1.68
GTF3A-208ENST00000493903 IL17BQ9UHF5 180 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 FBXO4Q9UKT5 387 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 LIPT1Q9Y234 373 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 WBP11Q9Y2W2 641 aaKnown RBP4.56□□□□□ -1.68
GTF3A-208ENST00000493903 POMT1Q9Y6A1 747 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 ARAP1Q96P48 1450 aa4.56□□□□□ -1.68
GTF3A-208ENST00000493903 A0A1W2PR77 199 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 LNP1A1A4G5 178 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 H0YAE9 185 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 INO80B-WBP1J3KQ70 363 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 IFNL4K9M1U5 179 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 PRPF4O43172 522 aaKnown RBP eCLIP4.55□□□□□ -1.68
GTF3A-208ENST00000493903 GPC4O75487 556 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 SLC22A3O75751 556 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 PEX11BO96011 259 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 HIST1H2ABP04908 130 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 LCKP06239 509 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 MMP9P14780 707 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 HLA-DPA1P20036 260 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 HIST1H2ADP20671 130 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 ITGAXP20702 1163 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 CASTP20810 708 aaKnown RBP4.55□□□□□ -1.68
GTF3A-208ENST00000493903 TACR2P21452 398 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 TCEA1P23193 301 aaKnown RBP4.55□□□□□ -1.68
GTF3A-208ENST00000493903 GRIA3P42263 894 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 SOX2P48431 317 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 NPY4RP50391 375 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 ARSEP51690 589 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 YWHAHQ04917 246 aaPredicted RBP4.55□□□□□ -1.68
GTF3A-208ENST00000493903 SLC14A1Q13336 389 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 TCTN1Q2MV58 587 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 MPP7Q5T2T1 576 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 LAIR1Q6GTX8 287 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 ISM2Q6H9L7 571 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 CLEC17AQ6ZS10 378 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 HIST3H2AQ7L7L0 130 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 ADCK2Q7Z695 626 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 TSPAN33Q86UF1 283 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 TMC8Q8IU68 726 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 ARID3BQ8IVW6 561 aaPredicted RBP4.55□□□□□ -1.68
GTF3A-208ENST00000493903 DPP10Q8N608 796 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 TEX9Q8N6V9 391 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 TMEM217Q8N7C4 229 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 PI4KAP1Q8N8J0 262 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.55□□□□□ -1.68
GTF3A-208ENST00000493903 HJURPQ8NCD3 748 aaPredicted RBP4.55□□□□□ -1.68
GTF3A-208ENST00000493903 IP6K1Q92551 441 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 DAZAP1Q96EP5 407 aaKnown RBP4.55□□□□□ -1.68
GTF3A-208ENST00000493903 CCDC17Q96LX7 622 aa4.55□□□□□ -1.68
GTF3A-208ENST00000493903 CCDC114Q96M63 670 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms