RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 LIG3P49916 1009 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 HDAC4P56524 1084 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 OR1D5P58170 312 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 MTM1Q13496 603 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 EFHC2Q5JST6 749 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 PHF19Q5T6S3 580 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 SPECC1LQ69YQ0 1117 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 TAF8Q7Z7C8 310 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 C17orf82Q86X59 251 aaPredicted RBP13.31□□□□□ -0.28
USF1-206ENST00000491629 NRROSQ86YC3 692 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 RCBTB1Q8NDN9 531 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 ZNF564Q8TBZ8 553 aaPredicted RBP13.31□□□□□ -0.28
USF1-206ENST00000491629 RXFP2Q8WXD0 754 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 CENPIQ92674 756 aaPredicted RBP13.31□□□□□ -0.28
USF1-206ENST00000491629 TMEM159Q96B96 161 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 TBC1D31Q96DN5 1066 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 HMCESQ96FZ2 354 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 NSMCE3Q96MG7 304 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 CMKLR1Q99788 373 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 NUDT22Q9BRQ3 303 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 LGR4Q9BXB1 951 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 NAA15Q9BXJ9 866 aaKnown RBP13.31□□□□□ -0.28
USF1-206ENST00000491629 RETREG1Q9H6L5 497 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 SPATS2LQ9NUQ6 558 aaKnown RBP13.31□□□□□ -0.28
USF1-206ENST00000491629 TMEM51Q9NW97 253 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 RWDD2AQ9UIY3 292 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 HPCAL4Q9UM19 191 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 ST14Q9Y5Y6 855 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 C2CD4BA6NLJ0 364 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 NUDT21O43809 227 aaKnown RBP13.3□□□□□ -0.28
USF1-206ENST00000491629 GADD45BO75293 160 aaPredicted RBP13.3□□□□□ -0.28
USF1-206ENST00000491629 IGSF6O95976 241 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 TNFP01375 233 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 MMEP08473 750 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 HTR1BP28222 390 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 RGRP47804 291 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 MAZP56270 477 aaKnown RBP13.3□□□□□ -0.28
USF1-206ENST00000491629 KIAA1024LP59773 190 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 RHOAP61586 193 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 FOXK1P85037 733 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 ELP6Q0PNE2 266 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 RALGDSQ12967 914 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 INO80DQ53TQ3 878 aaPredicted RBP13.3□□□□□ -0.28
USF1-206ENST00000491629 MIIPQ5JXC2 388 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 NAA35Q5VZE5 725 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 ZSCAN1Q8NBB4 408 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 OR56A4Q8NGH8 313 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 PTCD2Q8WV60 388 aaKnown RBP13.3□□□□□ -0.28
USF1-206ENST00000491629 B3GNT4Q9C0J1 378 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 ADNPQ9H2P0 1102 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 SUV39H2Q9H5I1 410 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 DAAM1Q9Y4D1 1078 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 CACNA1DQ01668 2161 aa13.3□□□□□ -0.28
USF1-206ENST00000491629 IGHV5-10-1A0A0J9YXX1 117 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 ZSCAN5CA6NGD5 496 aaPredicted RBP13.29□□□□□ -0.28
USF1-206ENST00000491629 RASA4BC9J798 803 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 RASA4O43374 803 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 LSM8O95777 96 aaKnown RBP13.29□□□□□ -0.28
USF1-206ENST00000491629 GP1BBP13224 206 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 LIFP15018 202 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 CHRNB2P17787 502 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 CR2P20023 1033 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 CD82P27701 267 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 TRIM23P36406 574 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 PTPN9P43378 593 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 POLE2P56282 527 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 BPIFB4P59827 614 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 RAD51Q06609 339 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 KCNAB2Q13303 367 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 SERINC3Q13530 473 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 NR1D2Q14995 579 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 BORAQ6PGQ7 559 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 ZNF438Q7Z4V0 828 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 CAMK1DQ8IU85 385 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 HCAR2Q8TDS4 363 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 EPS8L1Q8TE68 723 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 SLC20A1Q8WUM9 679 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 PATE1Q8WXA2 126 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 CASKIN2Q8WXE0 1202 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 PDCL3Q9H2J4 239 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 PCDHB11Q9Y5F2 797 aa13.29□□□□□ -0.28
USF1-206ENST00000491629 ZNF106Q9H2Y7 1883 aaKnown RBP13.29□□□□□ -0.28
USF1-206ENST00000491629 STMND1H3BQB6 276 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 RECQL5O94762 991 aaPredicted RBP13.28□□□□□ -0.28
USF1-206ENST00000491629 FGFR1OPO95684 399 aaKnown RBP13.28□□□□□ -0.28
USF1-206ENST00000491629 CPNE6O95741 557 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 FGF1P05230 155 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 CD1CP29017 333 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 UGT1A3P35503 534 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 SUOXP51687 545 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 RAPGEF1Q13905 1077 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 ARHGEF7Q14155 803 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 AMZ1Q400G9 498 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 KLHDC7AQ5VTJ3 777 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 LIPIQ6XZB0 460 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 PIM3Q86V86 326 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 RTL3Q8N8U3 475 aaKnown RBP13.28□□□□□ -0.28
USF1-206ENST00000491629 GPBAR1Q8TDU6 330 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 FAM172AQ8WUF8 416 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 CCDC74BQ96LY2 380 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms