RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 MBNL1Q9NR56 388 aaKnown RBP7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 LUZP4Q9P127 313 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 ITM2BQ9Y287 266 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 TLR6Q9Y2C9 796 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 MDC1Q14676 2089 aaKnown RBP7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 CNTRLQ7Z7A1 2325 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 TOR1BO14657 336 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 SPTLC2O15270 562 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 TSPAN6O43657 245 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 KRT86O43790 486 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 SNAP91O60641 907 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 EXOC3O60645 756 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 STK17BO94768 372 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 RASGRP1O95267 797 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 MAP3K6O95382 1288 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 LTFP02788 710 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 CTSEP14091 401 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 CD1CP29017 333 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 L1CAMP32004 1257 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 CSTF2P33240 577 aaKnown RBP eCLIP7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 PIK3CAP42336 1068 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 SEMA5AQ13591 1074 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 ARHGEF7Q14155 803 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 ERV3-1Q14264 604 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 ZRSR2Q15696 482 aaKnown RBP7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 GOLGA7BQ2TAP0 167 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 RRAGBQ5VZM2 374 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 CEP135Q66GS9 1140 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 JMJD6Q6NYC1 403 aaPredicted RBP7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 CENPQQ7L2Z9 268 aaPredicted RBP7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 VPS36Q86VN1 386 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 C17orf82Q86X59 251 aaPredicted RBP7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 CCDC65Q8IXS2 484 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 SIX6OS1Q8N1H7 587 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 OR4D9Q8NGE8 314 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 CLEC4CQ8WTT0 213 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 PDXPQ96GD0 296 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 CCDC114Q96M63 670 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 SERPINB11Q96P15 392 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 PSMB7Q99436 277 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 RRN3Q9NYV6 651 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 TMEM9Q9P0T7 183 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 PDP2Q9P2J9 529 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 RCOR3Q9P2K3 495 aaPredicted RBP7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 TFIP11Q9UBB9 837 aaKnown RBP7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 IL36AQ9UHA7 158 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 VPS28Q9UK41 221 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 TSPAN16Q9UKR8 245 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 LIMCH1Q9UPQ0 1083 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 PCDHGA9Q9Y5G4 932 aaKnown RBP7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 RPS6KL1Q9Y6S9 549 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 MYO7BQ6PIF6 2116 aa7.19□□□□□ -1.26
PDLIM1-203ENST00000490391 B4DGG1 531 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 AREL1O15033 823 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 EIF5BO60841 1220 aaKnown RBP7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 PPP6R2O75170 966 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 PDCP20941 246 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 BMP6P22004 513 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 ITGA3P26006 1051 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 PEX5P50542 639 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 PGDP52209 483 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 SLC8A3P57103 927 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 BST2Q10589 180 aaKnown RBP7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 SQSTM1Q13501 440 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 EIF4EBP2Q13542 120 aaPredicted RBP7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 IRF4Q15306 451 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 ZC3H12AQ5D1E8 599 aaKnown RBP7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 TTC39BQ5VTQ0 682 aaPredicted RBP7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 SPECC1LQ69YQ0 1117 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 FBXL22Q6P050 247 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 C22orf39Q6P5X5 142 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 RD3Q7Z3Z2 195 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 TAC4Q86UU9 113 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 FAM129CQ86XR2 697 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 NELFCDQ8IXH7 590 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 FAM186BQ8IYM0 893 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 ATP11CQ8NB49 1132 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 FAM46DQ8NEK8 389 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 TAS1R2Q8TE23 839 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 IRGQQ8WZA9 623 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 RNF34Q969K3 372 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 BTN2A3PQ96KV6 586 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 CTRCQ99895 268 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 TNKS2Q9H2K2 1166 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 TRIT1Q9H3H1 467 aaKnown RBP7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 APMAPQ9HDC9 416 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 CISHQ9NSE2 258 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 DMAC2Q9NW81 257 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 ZDHHC3Q9NYG2 299 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 CGNQ9P2M7 1197 aaKnown RBP7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 CCDC39Q9UFE4 941 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 VPS51Q9UID3 782 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 DGKBQ9Y6T7 804 aa7.18□□□□□ -1.26
PDLIM1-203ENST00000490391 AKAP6Q13023 2319 aa7.17□□□□□ -1.26
PDLIM1-203ENST00000490391 ANKUB1A6NFN9 424 aa7.17□□□□□ -1.26
PDLIM1-203ENST00000490391 PRSS44E7EML9 344 aa7.17□□□□□ -1.26
PDLIM1-203ENST00000490391 F5H5T6 163 aa7.17□□□□□ -1.26
PDLIM1-203ENST00000490391 IKBKBO14920 756 aa7.17□□□□□ -1.26
PDLIM1-203ENST00000490391 BMP15O95972 392 aa7.17□□□□□ -1.26
PDLIM1-203ENST00000490391 IGLV3-25P01717 112 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms