RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 SEMA4CQ9C0C4 833 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 CLSTN2Q9H4D0 955 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 WDR26Q9H7D7 661 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 FAM207AQ9NSI2 230 aaPredicted RBP11.86□□□□□ -0.51
FDPS-215ENST00000490140 SEPT11Q9NVA2 429 aaKnown RBP11.86□□□□□ -0.51
FDPS-215ENST00000490140 OR1A2Q9Y585 309 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 A0A1W2PQ67 120 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 A0A1W2PQC6 194 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 SIGLEC16A6NMB1 481 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 PIGNO95427 931 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 HOXC4P09017 264 aaPredicted RBP11.85□□□□□ -0.51
FDPS-215ENST00000490140 RFC1P35251 1148 aaPredicted RBP11.85□□□□□ -0.51
FDPS-215ENST00000490140 CSNK1DP48730 415 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 POLR2FP61218 127 aaKnown RBP11.85□□□□□ -0.51
FDPS-215ENST00000490140 C1QBPQ07021 282 aaKnown RBP11.85□□□□□ -0.51
FDPS-215ENST00000490140 NFATC3Q12968 1075 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 C14orf28Q4W4Y0 310 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 DPY19L2P1Q6NXN4 242 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 DCUN1D2Q6PH85 259 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 SPRED1Q7Z699 444 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 B3GNT8Q7Z7M8 397 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 PHF13Q86YI8 300 aaPredicted RBP11.85□□□□□ -0.51
FDPS-215ENST00000490140 FAM46DQ8NEK8 389 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 GPR156Q8NFN8 814 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 PDXPQ96GD0 296 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 EXOC2Q96KP1 924 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 CINPQ9BW66 212 aaPredicted RBP11.85□□□□□ -0.51
FDPS-215ENST00000490140 NUP62CLQ9H1M0 184 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 GANQ9H2C0 597 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 DPEP2Q9H4A9 486 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 LHX3Q9UBR4 397 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 PNMA8BQ9ULN7 279 aaPredicted RBP11.85□□□□□ -0.51
FDPS-215ENST00000490140 COQ6Q9Y2Z9 468 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 PTPN13Q12923 2485 aa11.85□□□□□ -0.51
FDPS-215ENST00000490140 A0A1W2PQM1 296 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 PMS2P1A4D2B8 440 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 B4DGG1 531 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 HGSO14964 777 aaPredicted RBP11.84□□□□□ -0.51
FDPS-215ENST00000490140 ARHGAP6O43182 974 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 EFSO43281 561 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 PRAMEF11O60813 436 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 PALMO75781 387 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 CELA2BP08218 269 aaPredicted RBP11.84□□□□□ -0.51
FDPS-215ENST00000490140 UNGP13051 313 aaPredicted RBP11.84□□□□□ -0.51
FDPS-215ENST00000490140 ATP1A2P50993 1020 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 RENBPP51606 427 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 ZNF135P52742 658 aaPredicted RBP11.84□□□□□ -0.51
FDPS-215ENST00000490140 AP1S1P61966 158 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 BCL2L1Q07817 233 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 ILF3Q12906 894 aaKnown RBP eCLIP11.84□□□□□ -0.51
FDPS-215ENST00000490140 RFTN1Q14699 578 aaPredicted RBP11.84□□□□□ -0.51
FDPS-215ENST00000490140 TCEA2Q15560 299 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 CLEC16AQ2KHT3 1053 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 PHF19Q5T6S3 580 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 WDR59Q6PJI9 974 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 ATG14Q6ZNE5 492 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 PIM3Q86V86 326 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 NEK11Q8NG66 645 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 PCMTD1Q96MG8 357 aaPredicted RBP11.84□□□□□ -0.51
FDPS-215ENST00000490140 MCEEQ96PE7 176 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 GSDMCQ9BYG8 508 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 NOL6Q9H6R4 1146 aaKnown RBP11.84□□□□□ -0.51
FDPS-215ENST00000490140 SP110Q9HB58 689 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 NLRC4Q9NPP4 1024 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 TAB2Q9NYJ8 693 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 LRIT1Q9P2V4 623 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 RABGEF1Q9UJ41 708 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 FZD10Q9ULW2 581 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 LRRK1Q38SD2 2015 aa11.84□□□□□ -0.51
FDPS-215ENST00000490140 PRAMEF33A0A0G2JMD5 474 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 RHPN2P1A8MT19 583 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 STMND1H3BQB6 276 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 DAPK3O43293 454 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 CCP110O43303 1012 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 PRAMEF10O60809 474 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 PPFIA2O75334 1257 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 RECQL5O94762 991 aaPredicted RBP11.83□□□□□ -0.52
FDPS-215ENST00000490140 CPNE6O95741 557 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 JAM2P57087 298 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 ZFP36L1Q07352 338 aaKnown RBP11.83□□□□□ -0.52
FDPS-215ENST00000490140 RAB6CQ53S08 254 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 TMCO4Q5TGY1 634 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 SPECC1LQ69YQ0 1117 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 OGFOD3Q6PK18 319 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 PHLDB2Q86SQ0 1253 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 PYROXD2Q8N2H3 581 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 Q8N9G6 341 aaPredicted RBP11.83□□□□□ -0.52
FDPS-215ENST00000490140 VOPP1Q96AW1 172 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 SEMA3CQ99985 751 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 DPYSL5Q9BPU6 564 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 RAB6CQ9H0N0 254 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 PHPT1Q9NRX4 125 aaPredicted RBP11.83□□□□□ -0.52
FDPS-215ENST00000490140 SAMSN1Q9NSI8 373 aaKnown RBP11.83□□□□□ -0.52
FDPS-215ENST00000490140 MOSPD1Q9UJG1 213 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 PCDHGA4Q9Y5G9 962 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 RNF215Q9Y6U7 377 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 ANKRD36A6QL64 1941 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 SCN8AQ9UQD0 1980 aa11.83□□□□□ -0.52
FDPS-215ENST00000490140 UBR5O95071 2799 aaPredicted RBP11.83□□□□□ -0.52
FDPS-215ENST00000490140 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms