RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 TDRD6O60522 2096 aaKnown RBP11.1□□□□□ -0.63
UBE4B-210ENST00000488228 PLXNB3Q9ULL4 1909 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 C5orf60A6NFR6 353 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 IGLON5A6NGN9 336 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 CAPN8A6NHC0 703 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 GOLGA8CPA6NN73 597 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 PDE2AO00408 941 aaPredicted RBP11.1□□□□□ -0.63
UBE4B-210ENST00000488228 LATO43561 262 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 TSPAN6O43657 245 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 MMP20O60882 483 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 GCATO75600 419 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 ZNF189O75820 626 aaPredicted RBP11.1□□□□□ -0.63
UBE4B-210ENST00000488228 METTL18O95568 372 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 SLC4A1P02730 911 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 ITGAVP06756 1048 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 PIRTP0C851 137 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 C6P13671 934 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 CD27P26842 260 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 CASQ1P31415 396 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 VIPR1P32241 457 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 CHRNA4P43681 627 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 GRIA4P48058 902 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 EPHB1P54762 984 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 WNT3AP56704 352 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 SPEM2Q0P670 501 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 SLC14A2Q15849 920 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 CNGA3Q16281 694 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 QPCTQ16769 361 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 SETMARQ53H47 684 aaPredicted RBP11.1□□□□□ -0.63
UBE4B-210ENST00000488228 SPDYCQ5MJ68 293 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 SYCP2LQ5T4T6 812 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 KDM7AQ6ZMT4 941 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 USP45Q70EL2 814 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 DCLK2Q8N568 766 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 CCDC89Q8N998 374 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 C12orf50Q8NA57 414 aaPredicted RBP11.1□□□□□ -0.63
UBE4B-210ENST00000488228 HCAR2Q8TDS4 363 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 CXorf40AQ8TE69 158 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 IFT43Q96FT9 208 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 LOXL4Q96JB6 756 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 MRGPRX2Q96LB1 330 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 MCCC1Q96RQ3 725 aaPredicted RBP11.1□□□□□ -0.63
UBE4B-210ENST00000488228 NAP1L3Q99457 506 aaPredicted RBP11.1□□□□□ -0.63
UBE4B-210ENST00000488228 FICDQ9BVA6 458 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 FSCN3Q9NQT6 498 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 FAM153AQ9UHL3 310 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 PILRBQ9UKJ0 227 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 PHTF1Q9UMS5 762 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 CEP250Q9BV73 2442 aa11.1□□□□□ -0.63
UBE4B-210ENST00000488228 A0A0J9YYE9 177 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 GOLGA6L10A0A0M3HER8 536 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 A0A1W2PPC4 97 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 A0A1W2PQ67 120 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 WNT9AO14904 365 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 RAD51BO15315 384 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 SLC31A1O15431 190 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 GFRA3O60609 400 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 PHF2O75151 1096 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 USP12O75317 370 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 TRBC1P01850 177 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 CFIP05156 583 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 RETP07949 1114 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 ATXN1LP0C7T5 689 aaKnown RBP11.09□□□□□ -0.63
UBE4B-210ENST00000488228 ELFN1P0C7U0 828 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 ZSCAN5DPP0CG00 497 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 HNF1BP35680 557 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 LIG3P49916 1009 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 SUOXP51687 545 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 GEMP55040 296 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 POLR2LP62875 67 aaKnown RBP11.09□□□□□ -0.63
UBE4B-210ENST00000488228 RPS21P63220 83 aaKnown RBP11.09□□□□□ -0.63
UBE4B-210ENST00000488228 CDK18Q07002 472 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 MPP3Q13368 585 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 SPARCL1Q14515 664 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 CYP1B1Q16678 543 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 P3H1Q32P28 736 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 TMEM52BQ4KMG9 183 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 PEAR1Q5VY43 1037 aaPredicted RBP11.09□□□□□ -0.63
UBE4B-210ENST00000488228 LRRC66Q68CR7 880 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 DENND2CQ68D51 928 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 NAPEPLDQ6IQ20 393 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 NEK5Q6P3R8 708 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 DRICH1Q6PGQ1 229 aaPredicted RBP11.09□□□□□ -0.63
UBE4B-210ENST00000488228 CREG2Q8IUH2 290 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 SYT12Q8IV01 421 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 SLC25A41Q8N5S1 370 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 C1orf216Q8TAB5 229 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 DNASE2BQ8WZ79 361 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 RMDN1Q96DB5 314 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 FEM1CQ96JP0 617 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 SERAC1Q96JX3 654 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 APOL2Q9BQE5 337 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 FSD1LQ9BXM9 530 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 DDX47Q9H0S4 455 aaKnown RBP11.09□□□□□ -0.63
UBE4B-210ENST00000488228 TM9SF3Q9HD45 589 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 PARD6AQ9NPB6 346 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 VPS45Q9NRW7 570 aa11.09□□□□□ -0.63
UBE4B-210ENST00000488228 H0Y8X5 98 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 BCAT2O15382 392 aaPredicted RBP11.08□□□□□ -0.64
UBE4B-210ENST00000488228 ANXA9O76027 345 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms