RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 LONP2Q86WA8 852 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 PPIL6Q8IXY8 311 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 AADATQ8N5Z0 425 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 FAM160A2Q8N612 972 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-229ENST00000486665 OR52K1Q8NGK4 314 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 PRCCQ92733 491 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-229ENST00000486665 IFT43Q96FT9 208 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 MRGPRX1Q96LB2 322 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 PWWP2AQ96N64 755 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 HHIPQ96QV1 700 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 ANKZF1Q9H8Y5 726 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 LRRC40Q9H9A6 602 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 GDF3Q9NR23 364 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 EIF2B3Q9NR50 452 aaKnown RBP12.86□□□□□ -0.35
HDAC6-229ENST00000486665 RXFP3Q9NSD7 469 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 PIH1D1Q9NWS0 290 aaKnown RBP12.86□□□□□ -0.35
HDAC6-229ENST00000486665 WHRNQ9P202 907 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 FRYQ5TBA9 3013 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 TSPAN11A1L157 253 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 GOLGA6CA6NDK9 693 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 GOLGA6BA6NDN3 693 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 ERI2A8K979 691 aaKnown RBP12.85□□□□□ -0.35
HDAC6-229ENST00000486665 C1QTNF3-AMACRE9PGA6 284 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 NDST3O95803 873 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 GOLGA6DP0CG33 693 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 TPH1P17752 444 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 CTPS1P17812 591 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 DRD3P35462 400 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 CARSP49589 748 aaKnown RBP12.85□□□□□ -0.35
HDAC6-229ENST00000486665 SEMG2Q02383 582 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 CNTN1Q12860 1018 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 MSLNQ13421 630 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-229ENST00000486665 SLC1A5Q15758 541 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 CSRP2Q16527 193 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 ERCC6LQ2NKX8 1250 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 LRRC73Q5JTD7 316 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 FAM46CQ5VWP2 391 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 CCDC70Q6NSX1 233 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 PARS2Q7L3T8 475 aaKnown RBP12.85□□□□□ -0.35
HDAC6-229ENST00000486665 CAND1Q86VP6 1230 aaKnown RBP12.85□□□□□ -0.35
HDAC6-229ENST00000486665 MCUQ8NE86 351 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 LPCAT1Q8NF37 534 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 NETO1Q8TDF5 533 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 HCAR2Q8TDS4 363 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 HMGB4Q8WW32 186 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 IFT81Q8WYA0 676 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 ART4Q93070 314 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 SIPA1Q96FS4 1042 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 NEUROG2Q9H2A3 272 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 PABPC3Q9H361 631 aaKnown RBP12.85□□□□□ -0.35
HDAC6-229ENST00000486665 FBRSQ9HAH7 460 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 POLMQ9NP87 494 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-229ENST00000486665 CASS4Q9NQ75 786 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 GOLGA6AQ9NYA3 693 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 DKK3Q9UBP4 350 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 SERGEFQ9UGK8 458 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 EBF1Q9UH73 591 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 CHD6Q8TD26 2715 aa12.85□□□□□ -0.35
HDAC6-229ENST00000486665 CKAP5Q14008 2032 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 A0A0U1RQS6 177 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 ANKRD66B4E2M5 251 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 LRP3O75074 770 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 AVILO75366 819 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 ADH1BP00325 375 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 CPP00450 1065 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 ALPIP09923 528 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 PIRTP0C851 137 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 C5AR1P21730 350 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 CA4P22748 312 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 ITGB7P26010 798 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 ABL2P42684 1182 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 PLTPP55058 493 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 TUBB4BP68371 445 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 CDK16Q00536 496 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 MTM1Q13496 603 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 MORF4L2Q15014 288 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 SF3A2Q15428 464 aaKnown RBP12.84□□□□□ -0.35
HDAC6-229ENST00000486665 FNBP1LQ5T0N5 605 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 LRRC8BQ6P9F7 803 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 KIAA1324Q6UXG2 1013 aaKnown RBP12.84□□□□□ -0.35
HDAC6-229ENST00000486665 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-229ENST00000486665 PPP1R21Q6ZMI0 780 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 ERN2Q76MJ5 926 aaKnown RBP12.84□□□□□ -0.35
HDAC6-229ENST00000486665 TTC7BQ86TV6 843 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 HOOK3Q86VS8 718 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 HDDC3Q8N4P3 179 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 BBOF1Q8ND07 529 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 TSTD1Q8NFU3 115 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 UBXN4Q92575 508 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 FSD1LQ9BXM9 530 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 ADGRE3Q9BY15 652 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 HDAC8Q9BY41 377 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 ARNT2Q9HBZ2 717 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 CD93Q9NPY3 652 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 FAM114A2Q9NRY5 505 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 ZDHHC18Q9NUE0 388 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 PHTF1Q9UMS5 762 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 PPIL1Q9Y3C6 166 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 SPO11Q9Y5K1 396 aa12.84□□□□□ -0.35
HDAC6-229ENST00000486665 CEP295Q9C0D2 2601 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms