RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 ERVMER34-1Q9H9K5 563 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 B4GALT6Q9UBX8 382 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 PHTF1Q9UMS5 762 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 GUCA1BQ9UMX6 200 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 ADGRG1Q9Y653 693 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 DNAH14Q0VDD8 3507 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 SPAARA0A1B0GVQ0 90 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 GOLGA8CPA6NN73 597 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 PCDHGA12O60330 932 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 PGLSO95336 258 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 FTCDO95954 541 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 CYP2A6P11509 494 aaPredicted RBP19.23■□□□□ 0.67
SNX17-206ENST00000484886 COPS2P61201 443 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 SIM1P81133 766 aaPredicted RBP19.23■□□□□ 0.67
SNX17-206ENST00000484886 FOXK2Q01167 660 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 LRRC14Q15048 493 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 ACOX1Q15067 660 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 IRF4Q15306 451 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 PPP2R5EQ16537 467 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 N4BP2L1Q5TBK1 243 aaPredicted RBP19.23■□□□□ 0.67
SNX17-206ENST00000484886 DENND2CQ68D51 928 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 USP45Q70EL2 814 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 ZC3H18Q86VM9 953 aaKnown RBP19.23■□□□□ 0.67
SNX17-206ENST00000484886 NDUFAF2Q8N183 169 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 UBL4BQ8N7F7 174 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 TFB1MQ8WVM0 346 aaKnown RBP19.23■□□□□ 0.67
SNX17-206ENST00000484886 AGAP3Q96P47 875 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 IL12RB2Q99665 862 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 CACNA1AO00555 2505 aa19.23■□□□□ 0.67
SNX17-206ENST00000484886 LRRK1Q38SD2 2015 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 KRT86O43790 486 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 SDC3O75056 442 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 PCCBP05166 539 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 CTPS1P17812 591 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 EPHA8P29322 1005 aaPredicted RBP19.22■□□□□ 0.67
SNX17-206ENST00000484886 VIPR1P32241 457 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 IGFALSP35858 605 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 CD86P42081 329 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 GRK6P43250 576 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 THOP1P52888 689 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 ADCY2Q08462 1091 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 RALGDSQ12967 914 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 PDE1CQ14123 709 aaPredicted RBP19.22■□□□□ 0.67
SNX17-206ENST00000484886 TRIP6Q15654 476 aaKnown RBP19.22■□□□□ 0.67
SNX17-206ENST00000484886 ALG1LQ6GMV1 187 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 LIPIQ6XZB0 460 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 KDM7AQ6ZMT4 941 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 NT5DC3Q86UY8 548 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 DCP2Q8IU60 420 aaKnown RBP19.22■□□□□ 0.67
SNX17-206ENST00000484886 LRRC8AQ8IWT6 810 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 SLC22A18ASQ8N1D0 253 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 TP53I13Q8NBR0 393 aaPredicted RBP19.22■□□□□ 0.67
SNX17-206ENST00000484886 CENPTQ96BT3 561 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 MBNL1Q9NR56 388 aaKnown RBP19.22■□□□□ 0.67
SNX17-206ENST00000484886 DNAJC28Q9NX36 388 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 PCOLCE2Q9UKZ9 415 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 PACSIN2Q9UNF0 486 aaPredicted RBP19.22■□□□□ 0.67
SNX17-206ENST00000484886 CHKBQ9Y259 395 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 BTBD3Q9Y2F9 522 aa19.22■□□□□ 0.67
SNX17-206ENST00000484886 CABIN1Q9Y6J0 2220 aa19.21■□□□□ 0.67
SNX17-206ENST00000484886 NIPAL4Q0D2K0 466 aa19.21■□□□□ 0.67
SNX17-206ENST00000484886 ARHGEF7Q14155 803 aa19.21■□□□□ 0.67
SNX17-206ENST00000484886 PRKD1Q15139 912 aaPredicted RBP19.21■□□□□ 0.67
SNX17-206ENST00000484886 SHBQ15464 509 aa19.21■□□□□ 0.67
SNX17-206ENST00000484886 FAM182AQ5T1J6 154 aa19.21■□□□□ 0.67
SNX17-206ENST00000484886 BBS12Q6ZW61 710 aa19.21■□□□□ 0.67
SNX17-206ENST00000484886 LPCAT1Q8NF37 534 aa19.21■□□□□ 0.67
SNX17-206ENST00000484886 ARRDC2Q8TBH0 407 aa19.21■□□□□ 0.67
SNX17-206ENST00000484886 ALG3Q92685 438 aa19.21■□□□□ 0.67
SNX17-206ENST00000484886 OSBPL8Q9BZF1 889 aa19.21■□□□□ 0.67
SNX17-206ENST00000484886 CFAP69A5D8W1 941 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 MIF4GDA9UHW6 222 aaKnown RBP19.2■□□□□ 0.66
SNX17-206ENST00000484886 H7C0C1 242 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 RECQL5O94762 991 aaPredicted RBP19.2■□□□□ 0.66
SNX17-206ENST00000484886 PDHA1P08559 390 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 ALPIP09923 528 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 CCDC175P0C221 793 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 ATP5OP48047 213 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 RXRGP48443 463 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 PEX5P50542 639 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 BNIP3Q12983 259 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 PTK2BQ14289 1009 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 WSCD2Q2TBF2 565 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 ZNF542PQ5EBM4 170 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 PARGQ86W56 976 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 RNF10Q8N5U6 811 aaKnown RBP19.2■□□□□ 0.66
SNX17-206ENST00000484886 CNTD1Q8N815 330 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 SAP25Q8TEE9 199 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 PIH1D2Q8WWB5 315 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 SPOCK2Q92563 424 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 CDC6Q99741 560 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 TDRD1Q9BXT4 1180 aaKnown RBP19.2■□□□□ 0.66
SNX17-206ENST00000484886 PCDH9Q9HC56 1237 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 CAPN6Q9Y6Q1 641 aa19.2■□□□□ 0.66
SNX17-206ENST00000484886 SPTY2D1-AS1A0A0U1RR47 76 aa19.19■□□□□ 0.66
SNX17-206ENST00000484886 NPIPB15A6NHN6 443 aaPredicted RBP19.19■□□□□ 0.66
SNX17-206ENST00000484886 APOC4-APOC2K7ER74 178 aa19.19■□□□□ 0.66
SNX17-206ENST00000484886 MTSS1O43312 755 aa19.19■□□□□ 0.66
SNX17-206ENST00000484886 APOC2P02655 101 aa19.19■□□□□ 0.66
SNX17-206ENST00000484886 ADRB1P08588 477 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms