RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 KAT6AQ92794 2004 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 CNTNAP2Q9UHC6 1331 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 MICAL3Q7RTP6 2002 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 LINC01553A4QN01 128 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 SAC3D1A6NKF1 404 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 KPNA7A9QM74 516 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 WDR64B1ANS9 1081 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 ZBTB42B2RXF5 422 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 RFXAPO00287 272 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 DLL1O00548 723 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 HOXC11O43248 304 aaPredicted RBP13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 GNAO1P09471 354 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 CAPGP40121 348 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 GRM5P41594 1212 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 GPD2P43304 727 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 QARSP47897 775 aaKnown RBP13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 SERPINB10P48595 397 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 PRKAA2P54646 552 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 DYNLT1P63172 113 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 GTF2BQ00403 316 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 ILF2Q12905 390 aaKnown RBP13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 CCDC58Q4VC31 144 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 DNAJC24Q6P3W2 148 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 UNC5AQ6ZN44 842 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 SFRP1Q8N474 314 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 ZNF781Q8N8C0 355 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 TDRD5Q8NAT2 981 aaKnown RBP13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 ZSCAN18Q8TBC5 510 aaPredicted RBP13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 BTN2A3PQ96KV6 586 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 C12orf10Q9HB07 376 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 PCDH12Q9NPG4 1184 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 CYP26B1Q9NR63 512 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 ADA2Q9NZK5 511 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 FBXO9Q9UK97 447 aaPredicted RBP13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 SARDHQ9UL12 918 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 RAD54BQ9Y620 910 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 MTCH2Q9Y6C9 303 aa13.22□□□□□ -0.29
CNKSR3-204ENST00000479339 A0A1W2PQ67 120 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 M0QZ92 97 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 DLGAP1O14490 977 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 TRIM24O15164 1050 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 HDAC3O15379 428 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 ICMTO60725 284 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 GAS7O60861 476 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 FYNP06241 537 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 ITIH1P19827 911 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 MMP8P22894 467 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 RPL10P27635 214 aaKnown RBP13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 ARRB2P32121 409 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 IFNA8P32881 189 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 NAMPTP43490 491 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 ATXN3P54252 364 aaPredicted RBP13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 PSME3P61289 254 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 ECT2LQ008S8 904 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 MAPRE2Q15555 327 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 HADHQ16836 314 aaKnown RBP13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 PUS10Q3MIT2 529 aaKnown RBP13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 GTF2IRD2BQ6EKJ0 949 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 DSG4Q86SJ6 1040 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 GTF2IRD2Q86UP8 949 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 DAW1Q8N136 415 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 ZCCHC7Q8N3Z6 543 aaKnown RBP13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 ASCC1Q8N9N2 400 aaKnown RBP13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 RDM1Q8NG50 284 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 CXorf38Q8TB03 319 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 SNX19Q92543 992 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 TTC9Q92623 222 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 TP53INP1Q96A56 240 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 ZUFSPQ96AP4 578 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 FAM167AQ96KS9 214 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 ACO2Q99798 780 aaKnown RBP13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 TEKT3Q9BXF9 490 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 PLAC1Q9HBJ0 212 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 MTRRQ9UBK8 725 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 VTI1BQ9UEU0 232 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 ZNF229Q9UJW7 825 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 DSEQ9UL01 958 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 COL4A6Q14031 1691 aa13.21□□□□□ -0.29
CNKSR3-204ENST00000479339 F8VP50 259 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 PSMD10O75832 226 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 CKMT2P17540 419 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 SFNP31947 248 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 GRIK1P39086 918 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 JAK3P52333 1124 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 RPL7AP62424 266 aaKnown RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 HSPA14Q0VDF9 509 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 BST2Q10589 180 aaKnown RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 DNASE1L3Q13609 305 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 SLC12A1Q13621 1099 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 DCUN1D2Q6PH85 259 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 RNF19BQ6ZMZ0 732 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 ATG14Q6ZNE5 492 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 SPRED2Q7Z698 418 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 BTLAQ7Z6A9 289 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 SLC22A16Q86VW1 577 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 MFSD4AQ8N468 514 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 CBR4Q8N4T8 237 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 TAB3Q8N5C8 712 aaPredicted RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 SIMC1Q8NDZ2 872 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms