RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 USP1O94782 785 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 LTFP02788 710 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 ALDOAP04075 364 aaKnown RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 RPLP2P05387 115 aaKnown RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 APOA4P06727 396 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 ENO1P06733 434 aaKnown RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 FGF3P11487 239 aaPredicted RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 ALOX15P16050 662 aaPredicted RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 ACADSP16219 412 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 GM2AP17900 193 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 ERCC2P18074 760 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 AOC1P19801 751 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 CYP2B6P20813 491 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 ATP6V1C1P21283 382 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 GLDCP23378 1020 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 PAX3P23760 479 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 PTPN3P26045 913 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 PCSK1P29120 753 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 TYK2P29597 1187 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 HOXC8P31273 242 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 CYP2C18P33260 490 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 HADHAP40939 763 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 SLC1A6P48664 564 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 TKTL1P51854 596 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 LIMK2P53671 638 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 PRKAA2P54646 552 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 MAP3K7CLP57077 242 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 LINC00310P59036 64 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 RPL10AP62906 217 aaKnown RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 MRPS6P82932 125 aaKnown RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 PDE1BQ01064 536 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 SLC34A1Q06495 639 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 ZNF33AQ06730 810 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 GALNT2Q10471 571 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 NME3Q13232 169 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 BLMHQ13867 455 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 RAB33AQ14088 237 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 PDE1CQ14123 709 aaPredicted RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 SEPT6Q14141 434 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 PRPSAP1Q14558 356 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 PCLAFQ15004 111 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 RCN1Q15293 331 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 TRMT5Q32P41 509 aaKnown RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 RAB41Q5JT25 222 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 TEDDM1Q5T9Z0 273 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 WSCD1Q658N2 575 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 OLFML2BQ68BL8 750 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 TWF2Q6IBS0 349 aaKnown RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 TAF2Q6P1X5 1199 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 RFWD3Q6PCD5 774 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 DSTYKQ6XUX3 929 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 PAQR9Q6ZVX9 377 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 PID1Q7Z2X4 250 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 NET1Q7Z628 596 aaPredicted RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 TTC7BQ86TV6 843 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 LCA5Q86VQ0 697 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 APLFQ8IW19 511 aaPredicted RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 SCML4Q8N228 414 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 CCDC33Q8N5R6 958 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 PPFIBP2Q8ND30 876 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 ABHD4Q8TB40 342 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 SLC7A14Q8TBB6 771 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 NDRG1Q92597 394 aaKnown RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 ZNF669Q96BR6 464 aaPredicted RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 HDAC11Q96DB2 347 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 SMARCD1Q96GM5 515 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 PRR11Q96HE9 360 aaPredicted RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 SENP8Q96LD8 212 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 RILPQ96NA2 401 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 PPP1R2P1Q96PQ5 205 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 DEPDC7Q96QD5 511 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 RBBP8Q99708 897 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 SYT15Q9BQS2 421 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 TRIM62Q9BVG3 475 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 CCDC106Q9BWC9 280 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 MAGEB5Q9BZ81 275 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 FOXQ1Q9C009 403 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 MIR1-1HGQ9H1L0 117 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 GBA3Q9H227 469 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 C1orf21Q9H246 121 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 WDR6Q9NNW5 1121 aaKnown RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 CRTAC1Q9NQ79 661 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 CHST12Q9NRB3 414 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 SNX15Q9NRS6 342 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 PIGVQ9NUD9 493 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 TMEM39AQ9NV64 488 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 DNAJC28Q9NX36 388 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 DDX43Q9NXZ2 648 aaKnown RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 STX18Q9P2W9 335 aaKnown RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 ZNF212Q9UDV6 495 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 DNAJB4Q9UDY4 337 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 FBXW11Q9UKB1 542 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 ANGPTL2Q9UKU9 493 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 CDH9Q9ULB4 789 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 EMCNQ9ULC0 261 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 VANGL2Q9ULK5 521 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 APOBEC2Q9Y235 224 aaKnown RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 ANKRD6Q9Y2G4 727 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 DNAJC16Q9Y2G8 782 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 TRPV2Q9Y5S1 764 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms