RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ITGA2P17301 1181 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 ALAS2P22557 587 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 MYF6P23409 242 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 CD40LGP29965 261 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 HTR7P34969 479 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 DDOSTP39656 456 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 KCNJ1P48048 391 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 ARHGDIBP52566 201 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 SLC12A2P55011 1212 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 LAMTOR4Q0VGL1 99 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 MMRN1Q13201 1228 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 TOP3AQ13472 1001 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 WDR44Q5JSH3 913 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 EFHC2Q5JST6 749 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 ZNF484Q5JVG2 852 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 ZNF767PQ75MW2 155 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 DNAAF5Q86Y56 855 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 TBC1D21Q8IYX1 336 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 LNX1Q8TBB1 728 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 COPS5Q92905 334 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 EMID1Q96A84 441 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 ZFYVE19Q96K21 471 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 SYT11Q9BT88 431 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 RBAKQ9NYW8 714 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 IL37Q9NZH6 218 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 ALG6Q9Y672 507 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 PRSS44E7EML9 344 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 SORBS2O94875 1100 aaKnown RBP12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 VNN1O95497 513 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 BGNP21810 368 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 EPHA3P29320 983 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 GRM5P41594 1212 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 MRPS22P82650 360 aaKnown RBP12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 ARHGAP1Q07960 439 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 FLOT2Q14254 428 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 TYSND1Q2T9J0 566 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 Q3ZCU0 254 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 TAPT1Q6NXT6 567 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 ARSKQ6UWY0 536 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 MAMDC4Q6UXC1 1216 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 GPR142Q7Z601 462 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 PLEKHH3Q7Z736 793 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 CAMK1DQ8IU85 385 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 FAM71AQ8IYT1 594 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 ZNF786Q8N393 782 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 RNF149Q8NC42 400 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 PPTC7Q8NI37 304 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 TAS1R2Q8TE23 839 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 SHC3Q92529 594 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 TFAP2CQ92754 450 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 MAGED4Q96JG8 741 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 RILPQ96NA2 401 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 GDF15Q99988 308 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 SLC13A1Q9BZW2 595 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 C1orf112Q9NSG2 853 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 PAQR5Q9NXK6 330 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 MAT2BQ9NZL9 334 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 A0A0X1KG70 313 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 SAGE2PA6NJ88 616 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 ZNF98A6NK75 572 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 ZBTB42B2RXF5 422 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 HTRA2O43464 458 aaPredicted RBP12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 AKAP10O43572 662 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 TOM1L1O75674 476 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 SEMA3DO95025 777 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 KCNK2O95069 426 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 YES1P07947 543 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 ZNF3P17036 446 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 IL12AP29459 219 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 ACOT2P49753 483 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 AQP5P55064 265 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 NLRP11P59045 1033 aaKnown RBP12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 GCNT1Q02742 428 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 UBAP2LQ14157 1087 aaKnown RBP12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 GRB14Q14449 540 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 ZNF181Q2M3W8 571 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 FAM209BQ5JX69 171 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 CACHD1Q5VU97 1274 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 CYP4F22Q6NT55 531 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 ATG14Q6ZNE5 492 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 PIK3C3Q8NEB9 887 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 HDAC2Q92769 488 aaKnown RBP12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 SEMA4DQ92854 862 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 HDAC11Q96DB2 347 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 FAM96AQ9H5X1 160 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 NTN4Q9HB63 628 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 TOPORSQ9NS56 1045 aaPredicted RBP12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 SLC17A7Q9P2U7 560 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 MTRRQ9UBK8 725 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 ENOPH1Q9UHY7 261 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 TCAF1Q9Y4C2 921 aa12.72□□□□□ -0.37
RTFDC1-207ENST00000477573 USP12O75317 370 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 DNAJB5O75953 348 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 PDGFAP04085 211 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 PRKCBP05771 671 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 LRPAP1P30533 357 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 CDH5P33151 784 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 PPP5CP53041 499 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 RELQ04864 619 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 CLCQ05315 142 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms