RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 TFEBP19484 476 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 CDYL2Q8N8U2 506 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 OR7A2PQ8NGA2 310 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 OR6K2Q8NGY2 324 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 C1orf50Q9BV19 199 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 IMP3Q9NV31 184 aaKnown RBP18.65■□□□□ 0.58
VARS2-209ENST00000477288 PCDHB9Q9Y5E1 797 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 ADRB2P07550 413 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 ITPKBP27987 946 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 AKT2P31751 481 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 FKBP1AP62942 108 aaKnown RBP18.65■□□□□ 0.58
VARS2-209ENST00000477288 SLC25A3Q00325 362 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 GRB14Q14449 540 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 MOB2Q70IA6 237 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 HSFY1Q96LI6 401 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 MCCC1Q96RQ3 725 aaPredicted RBP18.65■□□□□ 0.58
VARS2-209ENST00000477288 CDT1Q9H211 546 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 PRKAB1Q9Y478 270 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 PCDHGA3Q9Y5H0 932 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 FAM237BA0A1B0GVD1 139 aa18.64■□□□□ 0.58
VARS2-209ENST00000477288 SLC28A2O43868 658 aa18.64■□□□□ 0.58
VARS2-209ENST00000477288 MAFO75444 373 aaPredicted RBP18.64■□□□□ 0.58
VARS2-209ENST00000477288 CRYBB1P53674 252 aaPredicted RBP18.64■□□□□ 0.58
VARS2-209ENST00000477288 ADARP55265 1226 aaKnown RBP18.64■□□□□ 0.58
VARS2-209ENST00000477288 POMZP3Q6PJE2 187 aa18.64■□□□□ 0.58
VARS2-209ENST00000477288 METTL3Q86U44 580 aaKnown RBP18.64■□□□□ 0.58
VARS2-209ENST00000477288 OR4A15Q8NGL6 344 aa18.64■□□□□ 0.58
VARS2-209ENST00000477288 MBOAT7Q96N66 472 aa18.64■□□□□ 0.58
VARS2-209ENST00000477288 DUSP9Q99956 384 aaKnown RBP18.64■□□□□ 0.58
VARS2-209ENST00000477288 MMADHCQ9H3L0 296 aaPredicted RBP18.64■□□□□ 0.58
VARS2-209ENST00000477288 TRIM39Q9HCM9 518 aa18.64■□□□□ 0.58
VARS2-209ENST00000477288 ABCB10Q9NRK6 738 aa18.64■□□□□ 0.58
VARS2-209ENST00000477288 LRCH1Q9Y2L9 728 aa18.64■□□□□ 0.58
VARS2-209ENST00000477288 MTF2Q9Y483 593 aaPredicted RBP18.64■□□□□ 0.58
VARS2-209ENST00000477288 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.64■□□□□ 0.57
VARS2-209ENST00000477288 SCGNO76038 276 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 SNRPB2P08579 225 aaKnown RBP18.64■□□□□ 0.57
VARS2-209ENST00000477288 GRIA4P48058 902 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 STARP49675 285 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 FNIP1Q8TF40 1166 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 MYDGFQ969H8 173 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 CERS2Q96G23 380 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 TRNT1Q96Q11 434 aaKnown RBP18.64■□□□□ 0.57
VARS2-209ENST00000477288 CDADC1Q9BWV3 514 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 CLIC5Q9NZA1 410 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 PRODHO43272 600 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 NAGLUP54802 743 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 SUZ12Q15022 739 aaKnown RBP18.64■□□□□ 0.57
VARS2-209ENST00000477288 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.64■□□□□ 0.57
VARS2-209ENST00000477288 KCNK18Q7Z418 384 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 ZNF563Q8TA94 476 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 TEX47Q8TBZ9 253 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 HDAC7Q8WUI4 952 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 ERGIC3Q9Y282 383 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 PRMT3O60678 531 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 PSMG1O95456 288 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 TNK2Q07912 1038 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 L2HGDHQ9H9P8 463 aa18.64■□□□□ 0.57
VARS2-209ENST00000477288 A0A087X0B3 334 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 GOT1P17174 413 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 ITGA2P17301 1181 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 PEX6Q13608 980 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 VSIG10LQ86VR7 867 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 CAMK1DQ8IU85 385 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 ANKRD52Q8NB46 1076 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.63■□□□□ 0.573e-13■■□□□ 12.4
VARS2-209ENST00000477288 TLE6Q9H808 572 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 ACP6Q9NPH0 428 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 BLOC1S4Q9NUP1 217 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 KCNK4Q9NYG8 393 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 TAS2R14Q9NYV8 317 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 FAM198AQ9UFP1 575 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 TLR5O60602 858 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 GJB1P08034 283 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 LINC00032P0C843 101 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 MYBL2P10244 700 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 C1orf186Q6ZWK4 172 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 CXXC5Q7LFL8 322 aaKnown RBP18.63■□□□□ 0.57
VARS2-209ENST00000477288 PPP3R2Q96LZ3 170 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 LEF1Q9UJU2 399 aaPredicted RBP18.63■□□□□ 0.57
VARS2-209ENST00000477288 BTN3A3O00478 584 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 CBX2Q14781 532 aaPredicted RBP18.63■□□□□ 0.57
VARS2-209ENST00000477288 PPP1R26Q5T8A7 1209 aaPredicted RBP18.63■□□□□ 0.57
VARS2-209ENST00000477288 ACAT2Q9BWD1 397 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 CORO2BQ9UQ03 480 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 TFPIP10646 304 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 RPL3P39023 403 aaKnown RBP18.63■□□□□ 0.57
VARS2-209ENST00000477288 PTPN5P54829 565 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 STXBP1P61764 594 aaKnown RBP18.63■□□□□ 0.57
VARS2-209ENST00000477288 RFX4Q33E94 735 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 KCTD4Q8WVF5 259 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 CST1P01037 141 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 CDC25CP30307 473 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 ARHGDIBP52566 201 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 CAPSQ13938 189 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 GPR158Q5T848 1215 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 FKBP1CQ5VVH2 108 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 TTC23Q5W5X9 447 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 ESRP1Q6NXG1 681 aaKnown RBP18.63■□□□□ 0.57
VARS2-209ENST00000477288 C12orf50Q8NA57 414 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms