RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 SIRPB2Q5JXA9 342 aa19.18■□□□□ 0.66
SYF2-204ENST00000476231 KIAA0930Q6ICG6 404 aaPredicted RBP19.18■□□□□ 0.66
SYF2-204ENST00000476231 ESRP1Q6NXG1 681 aaKnown RBP19.18■□□□□ 0.66
SYF2-204ENST00000476231 ZNF570Q96NI8 536 aa19.18■□□□□ 0.66
SYF2-204ENST00000476231 EBF4Q9BQW3 602 aa19.18■□□□□ 0.66
SYF2-204ENST00000476231 RHOJQ9H4E5 214 aa19.18■□□□□ 0.66
SYF2-204ENST00000476231 IARS2Q9NSE4 1012 aaKnown RBP19.18■□□□□ 0.66
SYF2-204ENST00000476231 ZNF195O14628 629 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 C2P06681 752 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 RPSAP08865 295 aaKnown RBP19.17■□□□□ 0.66
SYF2-204ENST00000476231 ATXN1LP0C7T5 689 aaKnown RBP19.17■□□□□ 0.66
SYF2-204ENST00000476231 NUMBP49757 651 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 MSLNQ13421 630 aaPredicted RBP19.17■□□□□ 0.66
SYF2-204ENST00000476231 SEPT6Q14141 434 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 ACSBG2Q5FVE4 666 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 MPP7Q5T2T1 576 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 METTL21CQ5VZV1 264 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 CMC1Q7Z7K0 106 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 RBM15BQ8NDT2 890 aaKnown RBP19.17■□□□□ 0.66
SYF2-204ENST00000476231 VPS39Q96JC1 886 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 HCFC1R1Q9NWW0 138 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 ARHGAP26Q9UNA1 814 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 ACTL7AQ9Y615 435 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 CCDC78A2IDD5 438 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 G3V2L1 256 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 LEFTY2O00292 366 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 NRG2O14511 850 aaPredicted RBP19.17■□□□□ 0.66
SYF2-204ENST00000476231 LIN7AO14910 233 aaPredicted RBP19.17■□□□□ 0.66
SYF2-204ENST00000476231 GRM6O15303 877 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 TRIM13O60858 407 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 SIN3BO75182 1162 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 LYPLA1O75608 230 aaPredicted RBP19.17■□□□□ 0.66
SYF2-204ENST00000476231 PAPSS2O95340 614 aaPredicted RBP19.17■□□□□ 0.66
SYF2-204ENST00000476231 FGF1P05230 155 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 ARCN1P48444 511 aaKnown RBP19.17■□□□□ 0.66
SYF2-204ENST00000476231 IDH3AP50213 366 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 ALDH18A1P54886 795 aaKnown RBP19.17■□□□□ 0.66
SYF2-204ENST00000476231 CDH18Q13634 790 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 CAMK1Q14012 370 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 CYTH1Q15438 398 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 TRMT5Q32P41 509 aaKnown RBP19.17■□□□□ 0.66
SYF2-204ENST00000476231 MPPE1Q53F39 396 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 FSCBQ5H9T9 825 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 TDRD5Q8NAT2 981 aaKnown RBP19.17■□□□□ 0.66
SYF2-204ENST00000476231 SHKBP1Q8TBC3 707 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 FEM1AQ9BSK4 669 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 NMRAL1Q9HBL8 299 aa19.17■□□□□ 0.66
SYF2-204ENST00000476231 STX18Q9P2W9 335 aaKnown RBP19.17■□□□□ 0.66
SYF2-204ENST00000476231 HELZP42694 1942 aaKnown RBP19.16■□□□□ 0.66
SYF2-204ENST00000476231 SOBPA7XYQ1 873 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 PRR5-ARHGAP8B1AHC4 643 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 ZMPSTE24O75844 475 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 VAPBO95292 243 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 PSMG1O95456 288 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 HNRNPA1P09651 372 aaKnown RBP eCLIP19.16■□□□□ 0.66
SYF2-204ENST00000476231 CR2P20023 1033 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 PRDX6P30041 224 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 IRS1P35568 1242 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 CCR2P41597 374 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 PTDSS1P48651 473 aaKnown RBP19.16■□□□□ 0.66
SYF2-204ENST00000476231 ARF5P84085 180 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 ARHGAP8P85298 464 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 LAMB3Q13751 1172 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 ITGA9Q13797 1035 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 KPNB1Q14974 876 aaKnown RBP19.16■□□□□ 0.66
SYF2-204ENST00000476231 INO80DQ53TQ3 878 aaPredicted RBP19.16■□□□□ 0.66
SYF2-204ENST00000476231 TSTD2Q5T7W7 516 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 C6orf163Q5TEZ5 329 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 PDE12Q6L8Q7 609 aaKnown RBP19.16■□□□□ 0.66
SYF2-204ENST00000476231 ZC3HC1Q86WB0 502 aaKnown RBP19.16■□□□□ 0.66
SYF2-204ENST00000476231 SCUBE1Q8IWY4 988 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 BBS7Q8IWZ6 715 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 PLD6Q8N2A8 252 aaKnown RBP19.16■□□□□ 0.66
SYF2-204ENST00000476231 LEMD2Q8NC56 503 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 NAF1Q96HR8 494 aaKnown RBP19.16■□□□□ 0.66
SYF2-204ENST00000476231 SAMD11Q96NU1 681 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 OR51B4Q9Y5P0 310 aa19.16■□□□□ 0.66
SYF2-204ENST00000476231 INSIG1O15503 277 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 CLASP2O75122 1294 aaKnown RBP19.15■□□□□ 0.66
SYF2-204ENST00000476231 RFPL2O75678 378 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 GJB3O75712 270 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 ARHGEF15O94989 841 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 MYOGP15173 224 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 MZF1P28698 734 aaPredicted RBP19.15■□□□□ 0.66
SYF2-204ENST00000476231 TAF11Q15544 211 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 CNGA3Q16281 694 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 ARHGAP15Q53QZ3 475 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 GPR158Q5T848 1215 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 SPRED2Q7Z698 418 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 TTC16Q8NEE8 873 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 DDI1Q8WTU0 396 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 STMN2Q93045 179 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 GEMIN8Q9NWZ8 242 aaKnown RBP19.15■□□□□ 0.66
SYF2-204ENST00000476231 DNMT3BQ9UBC3 853 aaKnown RBP19.15■□□□□ 0.66
SYF2-204ENST00000476231 SLC2A6Q9UGQ3 507 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 VPS28Q9UK41 221 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 E2F8A0AVK6 867 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 XYLBO75191 536 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 CIB2O75838 187 aa19.15■□□□□ 0.66
SYF2-204ENST00000476231 ARNTP27540 789 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms