RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ESX1Q8N693 406 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 AGBL3Q8NEM8 1001 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 PPM1EQ8WY54 764 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 LBHD1Q9BQE6 289 aaPredicted RBP6.49□□□□□ -1.37
SMC5-203ENST00000475540 WASH6PQ9NQA3 447 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 KCND2Q9NZV8 630 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 MPP6Q9NZW5 540 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 MALT1Q9UDY8 824 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 SLCO3A1Q9UIG8 710 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 LSM4Q9Y4Z0 139 aaKnown RBP6.49□□□□□ -1.37
SMC5-203ENST00000475540 CPED1A4D0V7 1026 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 BCAT2O15382 392 aaPredicted RBP6.48□□□□□ -1.37
SMC5-203ENST00000475540 TFP02787 698 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 AGAP20933 346 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 HNRNPH1P31943 449 aaKnown RBP6.48□□□□□ -1.37
SMC5-203ENST00000475540 SNTA1Q13424 505 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 SLC9B1Q4ZJI4 515 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 FAM69AQ5T7M9 428 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 TXNDC8Q6A555 127 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 DHX40Q8IX18 779 aaKnown RBP6.48□□□□□ -1.37
SMC5-203ENST00000475540 BEST2Q8NFU1 509 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 CREB3L4Q8TEY5 395 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 ST8SIA4Q92187 359 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 GAREM1Q9H706 876 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 PLSCR4Q9NRQ2 329 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 PDP2Q9P2J9 529 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 SLC9A2Q9UBY0 812 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 ZNF112Q9UJU3 913 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 RCOR1Q9UKL0 485 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 A4GNTQ9UNA3 340 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 CYP46A1Q9Y6A2 500 aa6.48□□□□□ -1.37
SMC5-203ENST00000475540 A0A1B0GUV1 79 aa6.47□□□□□ -1.37
SMC5-203ENST00000475540 MAGEA13PA6NCF6 341 aa6.47□□□□□ -1.37
SMC5-203ENST00000475540 TTC36A6NLP5 189 aa6.47□□□□□ -1.37
SMC5-203ENST00000475540 ARL1P40616 181 aaPredicted RBP6.47□□□□□ -1.37
SMC5-203ENST00000475540 GABRB2P47870 512 aa6.47□□□□□ -1.37
SMC5-203ENST00000475540 KRTAP10-9P60411 292 aa6.47□□□□□ -1.37
SMC5-203ENST00000475540 RNPS1Q15287 305 aaKnown RBP6.47□□□□□ -1.37
SMC5-203ENST00000475540 AMZ1Q400G9 498 aa6.47□□□□□ -1.37
SMC5-203ENST00000475540 PPP6R3Q5H9R7 873 aaPredicted RBP6.47□□□□□ -1.37
SMC5-203ENST00000475540 SLC9C2Q5TAH2 1124 aa6.47□□□□□ -1.37
SMC5-203ENST00000475540 B3GNT6Q6ZMB0 384 aa6.47□□□□□ -1.37
SMC5-203ENST00000475540 TDRPQ86YL5 185 aa6.47□□□□□ -1.37
SMC5-203ENST00000475540 KXD1Q9BQD3 176 aa6.47□□□□□ -1.37
SMC5-203ENST00000475540 RETREG1Q9H6L5 497 aa6.47□□□□□ -1.37
SMC5-203ENST00000475540 GJD2Q9UKL4 321 aa6.47□□□□□ -1.37
SMC5-203ENST00000475540 SAA2-SAA4A0A096LPE2 208 aa6.46□□□□□ -1.38
SMC5-203ENST00000475540 NPIPB11E5RHQ5 1161 aa6.46□□□□□ -1.38
SMC5-203ENST00000475540 NPHP1O15259 732 aa6.46□□□□□ -1.38
SMC5-203ENST00000475540 SNRNP70P08621 437 aaKnown RBP6.46□□□□□ -1.38
SMC5-203ENST00000475540 GNAQP50148 359 aa6.46□□□□□ -1.38
SMC5-203ENST00000475540 TUBP50607 506 aa6.46□□□□□ -1.38
SMC5-203ENST00000475540 EFNA5P52803 228 aa6.46□□□□□ -1.38
SMC5-203ENST00000475540 ERVFC1-1P60608 527 aa6.46□□□□□ -1.38
SMC5-203ENST00000475540 SGO1Q5FBB7 561 aa6.46□□□□□ -1.38
SMC5-203ENST00000475540 LINGO2Q7L985 606 aa6.46□□□□□ -1.38
SMC5-203ENST00000475540 NR2C2APQ86WQ0 139 aa6.46□□□□□ -1.38
SMC5-203ENST00000475540 KLHL29Q96CT2 875 aa6.46□□□□□ -1.38
SMC5-203ENST00000475540 BICD1Q96G01 975 aa6.46□□□□□ -1.38
SMC5-203ENST00000475540 TBATAQ96M53 351 aa6.46□□□□□ -1.38
SMC5-203ENST00000475540 ZNF385AQ96PM9 386 aaKnown RBP6.46□□□□□ -1.38
SMC5-203ENST00000475540 SMARCAL1Q9NZC9 954 aa6.46□□□□□ -1.38
SMC5-203ENST00000475540 ARHGAP26Q9UNA1 814 aa6.46□□□□□ -1.38
SMC5-203ENST00000475540 SEC14L5O43304 696 aa6.45□□□□□ -1.38
SMC5-203ENST00000475540 SHMT1P34896 483 aa6.45□□□□□ -1.38
SMC5-203ENST00000475540 EFNB3Q15768 340 aa6.45□□□□□ -1.38
SMC5-203ENST00000475540 MMEL1Q495T6 779 aa6.45□□□□□ -1.38
SMC5-203ENST00000475540 DLK2Q6UY11 383 aa6.45□□□□□ -1.38
SMC5-203ENST00000475540 C3orf30Q96M34 536 aa6.45□□□□□ -1.38
SMC5-203ENST00000475540 PAIP1Q9H074 479 aaKnown RBP6.45□□□□□ -1.38
SMC5-203ENST00000475540 DDX4Q9NQI0 724 aaKnown RBP6.45□□□□□ -1.38
SMC5-203ENST00000475540 GTF2A1LQ9UNN4 478 aa6.45□□□□□ -1.38
SMC5-203ENST00000475540 CRYL1Q9Y2S2 319 aa6.45□□□□□ -1.38
SMC5-203ENST00000475540 IFITM10A6NMD0 228 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 TAF4O00268 1085 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 CLGNO14967 610 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 LDB3O75112 727 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 NDUFS7O75251 213 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 TIPRLO75663 272 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 CLDN14O95500 239 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 SRCP12931 536 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 ABCD1P33897 745 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 NEXNQ0ZGT2 675 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 PTP4A2Q12974 167 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 PRICKLE4Q2TBC4 344 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 FBXO46Q6PJ61 603 aaPredicted RBP6.44□□□□□ -1.38
SMC5-203ENST00000475540 MTSS1LQ765P7 747 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 DSELQ8IZU8 1212 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 ZBTB2Q8N680 514 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 SAAL1Q96ER3 474 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 CSF3RQ99062 836 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 PLEKHA4Q9H4M7 779 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 ZNF556Q9HAH1 456 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 MKKSQ9NPJ1 570 aaPredicted RBP6.44□□□□□ -1.38
SMC5-203ENST00000475540 FBXO9Q9UK97 447 aaPredicted RBP6.44□□□□□ -1.38
SMC5-203ENST00000475540 SARDHQ9UL12 918 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 UTYO14607 1347 aa6.44□□□□□ -1.38
SMC5-203ENST00000475540 TMEM202A6NGA9 273 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 LRRC53A6NM62 1247 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 PMS2P2O95744 297 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms