RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CDKL3Q8IVW4 592 aaPredicted RBP15.8■□□□□ 0.12
CPSF3-203ENST00000475482 UMODL1-AS1Q8N2C9 162 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 PQLC3Q8N755 202 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 BBOF1Q8ND07 529 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 ADAMTS14Q8WXS8 1223 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 LRIG1Q96JA1 1093 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 AASDHPPTQ9NRN7 309 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 DMGDHQ9UI17 866 aaKnown RBP15.8■□□□□ 0.12
CPSF3-203ENST00000475482 DNPEPQ9ULA0 475 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 BTBD3Q9Y2F9 522 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 NEUROG3Q9Y4Z2 214 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 PCDHB9Q9Y5E1 797 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 HEY1Q9Y5J3 304 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 GOLGA4Q13439 2230 aaKnown RBP15.79■□□□□ 0.12
CPSF3-203ENST00000475482 ZSCAN5CA6NGD5 496 aaPredicted RBP15.79■□□□□ 0.12
CPSF3-203ENST00000475482 PRAMEF26H0Y7S4 382 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 H7C0C1 242 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 HYAL3O43820 417 aaPredicted RBP15.79■□□□□ 0.12
CPSF3-203ENST00000475482 GSRP00390 522 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 FTH1P19P0C7X4 201 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 RBP3P10745 1247 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 SPINK2P20155 84 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 AMPD1P23109 780 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 ACTN2P35609 894 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 PTGIRP43119 386 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 ATP5OP48047 213 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 KCNJ1P48048 391 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 RXRGP48443 463 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 PTK6Q13882 451 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 PAFAH1B3Q15102 231 aaKnown RBP15.79■□□□□ 0.12
CPSF3-203ENST00000475482 OASLQ15646 514 aaKnown RBP15.79■□□□□ 0.12
CPSF3-203ENST00000475482 ZNF284Q2VY69 593 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 TMEM259Q4ZIN3 620 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 SETMARQ53H47 684 aaPredicted RBP15.79■□□□□ 0.12
CPSF3-203ENST00000475482 INO80DQ53TQ3 878 aaPredicted RBP15.79■□□□□ 0.12
CPSF3-203ENST00000475482 DARS2Q6PI48 645 aaKnown RBP15.79■□□□□ 0.12
CPSF3-203ENST00000475482 SLCO6A1Q86UG4 719 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 HORMAD1Q86X24 394 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 SPATS2Q86XZ4 545 aaKnown RBP15.79■□□□□ 0.12
CPSF3-203ENST00000475482 LZTR1Q8N653 840 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 GRIN3AQ8TCU5 1115 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 RHBDD1Q8TEB9 315 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 SETD7Q8WTS6 366 aaKnown RBP15.79■□□□□ 0.12
CPSF3-203ENST00000475482 HNRNPLLQ8WVV9 542 aaKnown RBP15.79■□□□□ 0.12
CPSF3-203ENST00000475482 CASKIN2Q8WXE0 1202 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 ANKRD7Q92527 254 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 GATA6Q92908 595 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 PPP1R16AQ96I34 528 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 CDC6Q99741 560 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 KLC2Q9H0B6 622 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 BRD8Q9H0E9 1235 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 GDF3Q9NR23 364 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 HPCAL4Q9UM19 191 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 MSRB2Q9Y3D2 182 aa15.79■□□□□ 0.12
CPSF3-203ENST00000475482 A0A1W2PQU0 124 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 PPP1R12AO14974 1030 aaPredicted RBP15.78■□□□□ 0.12
CPSF3-203ENST00000475482 AP1G1O43747 822 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 ERCC2P18074 760 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 MX2P20592 715 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 MAT2AP31153 395 aaKnown RBP15.78■□□□□ 0.12
CPSF3-203ENST00000475482 GRK6P43250 576 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 CALCOCO2Q13137 446 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 PDK1Q15118 436 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 PARP15Q460N3 678 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 SLC45A4Q5BKX6 768 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 NCBP2-AS2Q69YL0 99 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 C4orf22Q6V702 233 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 CCNI2Q6ZMN8 369 aaPredicted RBP15.78■□□□□ 0.12
CPSF3-203ENST00000475482 OR2AP1Q8NGE2 309 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 SAP25Q8TEE9 199 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 SEC14L1Q92503 715 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 LRRC45Q96CN5 670 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 TM6SF2Q9BZW4 377 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 ARFGAP3Q9NP61 516 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 DYRK4Q9NR20 520 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 HECAQ9UBI9 543 aaPredicted RBP15.78■□□□□ 0.12
CPSF3-203ENST00000475482 ASIC3Q9UHC3 531 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 ZFR2Q9UPR6 939 aaKnown RBP15.78■□□□□ 0.12
CPSF3-203ENST00000475482 FADS3Q9Y5Q0 445 aa15.78■□□□□ 0.12
CPSF3-203ENST00000475482 RASA4BC9J798 803 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 YKT6O15498 198 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 MTSS1O43312 755 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 RASA4O43374 803 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 MAGEC1O60732 1142 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 STK10O94804 968 aaKnown RBP15.77■□□□□ 0.12
CPSF3-203ENST00000475482 KRT14P02533 472 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 PROS1P07225 676 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 ADRB3P13945 408 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 H2AFXP16104 143 aaPredicted RBP15.77■□□□□ 0.12
CPSF3-203ENST00000475482 PECAM1P16284 738 aaPredicted RBP15.77■□□□□ 0.12
CPSF3-203ENST00000475482 NEK3P51956 506 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 SNRPD1P62314 119 aaKnown RBP15.77■□□□□ 0.12
CPSF3-203ENST00000475482 VSNL1P62760 191 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 CAV1Q03135 178 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 SERINC3Q13530 473 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 HLTFQ14527 1009 aaKnown RBP eCLIP15.77■□□□□ 0.12
CPSF3-203ENST00000475482 PRAMEF14Q5SWL7 426 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 DUPD1Q68J44 220 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 UNQ6494/PRO21346Q6UXR6 183 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 KANSL1Q7Z3B3 1105 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms