RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 TNFP01375 233 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 MPSTP25325 297 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 UBAP2LQ14157 1087 aaKnown RBP12.69□□□□□ -0.38
TRAF4-209ENST00000473421 C14orf28Q4W4Y0 310 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 EFHC2Q5JST6 749 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 NKAIN2Q5VXU1 208 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 SPECC1LQ69YQ0 1117 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 TBC1D31Q96DN5 1066 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 CMKLR1Q99788 373 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 C1QTNF7Q9BXJ2 289 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 DPEP2Q9H4A9 486 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 SUV39H2Q9H5I1 410 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 SUDS3Q9H7L9 328 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-209ENST00000473421 TMEM9Q9P0T7 183 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 HPCAL4Q9UM19 191 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 SPENQ96T58 3664 aaKnown RBP12.68□□□□□ -0.38
TRAF4-209ENST00000473421 IGHV5-10-1A0A0J9YXX1 117 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 CLEC18AA5D8T8 446 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 TMEM110-MUSTN1A8MSY1 372 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 RASA4BC9J798 803 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 RASA4O43374 803 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 PPFIA2O75334 1257 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 RECQL5O94762 991 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-209ENST00000473421 IGSF6O95976 241 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 LIFP15018 202 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 CD1CP29017 333 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 ETFBP38117 255 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 MMP12P39900 470 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 MTIF2P46199 727 aaKnown RBP12.68□□□□□ -0.38
TRAF4-209ENST00000473421 GEMIN4P57678 1058 aaKnown RBP12.68□□□□□ -0.38
TRAF4-209ENST00000473421 PTP4A2Q12974 167 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 SERINC3Q13530 473 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 PTPRRQ15256 657 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 ACBD5Q5T8D3 534 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-209ENST00000473421 KLHDC7AQ5VTJ3 777 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 CLEC18BQ6UXF7 455 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 ARCQ7LC44 396 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 ZNF354CQ86Y25 554 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 CLEC18CQ8NCF0 446 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 OR56A4Q8NGH8 313 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 ZNF564Q8TBZ8 553 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-209ENST00000473421 EPS8L1Q8TE68 723 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 CENPIQ92674 756 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-209ENST00000473421 PDFQ9HBH1 243 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 CYP4F12Q9HCS2 524 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 SEPT10Q9P0V9 454 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 NOCTQ9UK39 431 aaKnown RBP12.68□□□□□ -0.38
TRAF4-209ENST00000473421 B3GALT1Q9Y5Z6 326 aa12.68□□□□□ -0.38
TRAF4-209ENST00000473421 USP9YO00507 2555 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-209ENST00000473421 TTC24A2A3L6 582 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-209ENST00000473421 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-209ENST00000473421 NKX2-8O15522 239 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 DUX1O43812 170 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 FGF1P05230 155 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 PNLIPP16233 465 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 MMP8P22894 467 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 AK4P27144 223 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-209ENST00000473421 HTR1BP28222 390 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 ALDH4A1P30038 563 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 CSF2RBP32927 897 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 RFC1P35251 1148 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-209ENST00000473421 POLE2P56282 527 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 BPIFB4P59827 614 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 FOXK1P85037 733 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 MTM1Q13496 603 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 ARHGEF7Q14155 803 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 AGERQ15109 404 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 CAMK4Q16566 473 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 INO80DQ53TQ3 878 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-209ENST00000473421 LIPIQ6XZB0 460 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 C17orf82Q86X59 251 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-209ENST00000473421 RTL3Q8N8U3 475 aaKnown RBP12.67□□□□□ -0.38
TRAF4-209ENST00000473421 OR6C4Q8NGE1 309 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 FAM172AQ8WUF8 416 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 RNF31Q96EP0 1072 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 CCDC74BQ96LY2 380 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 PCDHB18PQ96TA0 734 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 C11orf70Q9BRQ4 267 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 NDST4Q9H3R1 872 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 ZNF71Q9NQZ8 489 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-209ENST00000473421 OCIAD1Q9NX40 245 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 ATP8A1Q9Y2Q0 1164 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 PLEKHM1Q9Y4G2 1056 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 PCDHB11Q9Y5F2 797 aa12.67□□□□□ -0.38
TRAF4-209ENST00000473421 USP9XQ93008 2570 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-209ENST00000473421 A0A0U1RQS6 177 aa12.66□□□□□ -0.38
TRAF4-209ENST00000473421 PPM1DO15297 605 aa12.66□□□□□ -0.38
TRAF4-209ENST00000473421 NUDT21O43809 227 aaKnown RBP12.66□□□□□ -0.38
TRAF4-209ENST00000473421 ECEL1O95672 775 aa12.66□□□□□ -0.38
TRAF4-209ENST00000473421 FGFR1OPO95684 399 aaKnown RBP12.66□□□□□ -0.38
TRAF4-209ENST00000473421 LSM8O95777 96 aaKnown RBP12.66□□□□□ -0.38
TRAF4-209ENST00000473421 CYP1A1P04798 512 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-209ENST00000473421 SFTPCP11686 197 aa12.66□□□□□ -0.38
TRAF4-209ENST00000473421 CR2P20023 1033 aa12.66□□□□□ -0.38
TRAF4-209ENST00000473421 XPAP23025 273 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-209ENST00000473421 EPHB2P29323 1055 aa12.66□□□□□ -0.38
TRAF4-209ENST00000473421 UGT1A3P35503 534 aa12.66□□□□□ -0.38
TRAF4-209ENST00000473421 TRIM23P36406 574 aa12.66□□□□□ -0.38
TRAF4-209ENST00000473421 KLK7P49862 253 aa12.66□□□□□ -0.38
TRAF4-209ENST00000473421 KIAA1024LP59773 190 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms