RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 PRPSAP2O60256 369 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 CST8O60676 142 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 TTC4O95801 387 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 APOC2P02655 101 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 SHBGP04278 402 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 RHOQP17081 205 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 SERPINH1P50454 418 aaKnown RBP17.82■□□□□ 0.44
MRPL28-208ENST00000469744 SLC14A1Q13336 389 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 MORF4L2Q15014 288 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 TRIP13Q15645 432 aaPredicted RBP17.82■□□□□ 0.44
MRPL28-208ENST00000469744 TNFAIP8L3Q5GJ75 292 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 IL27RAQ6UWB1 636 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 CENPHQ9H3R5 247 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 AASDHPPTQ9NRN7 309 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 TM7SF3Q9NS93 570 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 TMEM248Q9NWD8 314 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 TPX2Q9ULW0 747 aaKnown RBP17.82■□□□□ 0.44
MRPL28-208ENST00000469744 NOVA2Q9UNW9 492 aaKnown RBP17.82■□□□□ 0.44
MRPL28-208ENST00000469744 FARP1Q9Y4F1 1045 aaPredicted RBP17.82■□□□□ 0.44
MRPL28-208ENST00000469744 C10orf142B7Z368 130 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 PLRG1O43660 514 aaKnown RBP17.81■□□□□ 0.44
MRPL28-208ENST00000469744 ZNF821O75541 412 aaPredicted RBP17.81■□□□□ 0.44
MRPL28-208ENST00000469744 WNT1P04628 370 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 ABHD2P08910 425 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 CCR5P51681 352 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 RACK1P63244 317 aaKnown RBP17.81■□□□□ 0.44
MRPL28-208ENST00000469744 IL9RQ01113 521 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 OTUD4Q01804 1114 aaKnown RBP17.81■□□□□ 0.44
MRPL28-208ENST00000469744 SCAPQ12770 1279 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 KCTD19Q17RG1 926 aaPredicted RBP17.81■□□□□ 0.44
MRPL28-208ENST00000469744 EFHC2Q5JST6 749 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 RETSATQ6NUM9 610 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 DPY19L3Q6ZPD9 716 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 CYP4V2Q6ZWL3 525 aaPredicted RBP17.81■□□□□ 0.44
MRPL28-208ENST00000469744 ACTL9Q8TC94 416 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 SETD7Q8WTS6 366 aaKnown RBP17.81■□□□□ 0.44
MRPL28-208ENST00000469744 FAM131CQ96AQ9 280 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 ARRDC3Q96B67 414 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 SERAC1Q96JX3 654 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 SERPINB12Q96P63 405 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 ACE2Q9BYF1 805 aaPredicted RBP17.81■□□□□ 0.44
MRPL28-208ENST00000469744 TM6SF2Q9BZW4 377 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 GPATCH2LQ9NWQ4 482 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 PCSK1NQ9UHG2 260 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 SHOC2Q9UQ13 582 aa17.81■□□□□ 0.44
MRPL28-208ENST00000469744 H0Y8X5 98 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 CREB3O43889 395 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 CD160O95971 181 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 RECQLP46063 649 aaPredicted RBP17.8■□□□□ 0.44
MRPL28-208ENST00000469744 MAPKAPK2P49137 400 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 C21orf59P57076 290 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 TAS2R38P59533 333 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 SHC2P98077 582 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 SMTNL2Q2TAL5 461 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 P3H1Q32P28 736 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 ARSIQ5FYB1 569 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 PRAMEF14Q5SWL7 426 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 PIP5KL1Q5T9C9 394 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 CCDC25Q86WR0 208 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 RFX6Q8HWS3 928 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 ARHGEF2Q92974 986 aaKnown RBP17.8■□□□□ 0.44
MRPL28-208ENST00000469744 TTC25Q96NG3 672 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 PEBP4Q96S96 227 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 MAK16Q9BXY0 300 aaKnown RBP17.8■□□□□ 0.44
MRPL28-208ENST00000469744 IL36AQ9UHA7 158 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 PRDM4Q9UKN5 801 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 FZD10Q9ULW2 581 aa17.8■□□□□ 0.44
MRPL28-208ENST00000469744 RASGRF2O14827 1237 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 RGS16O15492 202 aaPredicted RBP17.79■□□□□ 0.44
MRPL28-208ENST00000469744 SLC7A4O43246 635 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 LATO43561 262 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 RAMP2O60895 175 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 LEFTY1O75610 366 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 EPHB2P29323 1055 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 L1CAMP32004 1257 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 CTSKP43235 329 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 ATP1A2P50993 1020 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 MAGOHP61326 146 aaKnown RBP17.79■□□□□ 0.44
MRPL28-208ENST00000469744 ZNF354CQ86Y25 554 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 OR6K2Q8NGY2 324 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 HSPH1Q92598 858 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 KLK6Q92876 244 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 CENPTQ96BT3 561 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 FAM118BQ9BPY3 351 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 NOL6Q9H6R4 1146 aaKnown RBP17.79■□□□□ 0.44
MRPL28-208ENST00000469744 BTBD3Q9Y2F9 522 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 PCDHB9Q9Y5E1 797 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 WASF2Q9Y6W5 498 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 USP24Q9UPU5 2620 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 IGF2RP11717 2491 aa17.79■□□□□ 0.44
MRPL28-208ENST00000469744 VILLO15195 856 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 HYAL3O43820 417 aaPredicted RBP17.78■□□□□ 0.44
MRPL28-208ENST00000469744 PRNPP04156 253 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 ZNF883P0CG24 379 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 TGM2P21980 687 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 CD38P28907 300 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 ATP5DP30049 168 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 STIP1P31948 543 aaKnown RBP17.78■□□□□ 0.44
MRPL28-208ENST00000469744 GKP32189 559 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 ETFBP38117 255 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms