RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 FAM129BQ96TA1 746 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 FMO2Q99518 471 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 SUV39H2Q9H5I1 410 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 TMEM165Q9HC07 324 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 POLR3BQ9NW08 1133 aaPredicted RBP6.91□□□□□ -1.3
SCAF4-204ENST00000467731 KPNA3O00505 521 aaPredicted RBP6.9□□□□□ -1.3
SCAF4-204ENST00000467731 PSMD3O43242 534 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 PGLSO95336 258 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 ATXN1LP0C7T5 689 aaKnown RBP6.9□□□□□ -1.3
SCAF4-204ENST00000467731 COL9A1P20849 921 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 CA4P22748 312 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 CDH17Q12864 832 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 LRRC32Q14392 662 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 GAS6Q14393 721 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 STARD3Q14849 445 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 HIF1AQ16665 826 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 FNBP1LQ5T0N5 605 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 ARMC12Q5T9G4 340 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 DENND5AQ6IQ26 1287 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 LRRC8BQ6P9F7 803 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 GDPD4Q6W3E5 623 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 PPP1R21Q6ZMI0 780 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 SDCCAG8Q86SQ7 713 aaPredicted RBP6.9□□□□□ -1.3
SCAF4-204ENST00000467731 ZSWIM9Q86XI8 627 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 MMAAQ8IVH4 418 aaKnown RBP6.9□□□□□ -1.3
SCAF4-204ENST00000467731 PAF1Q8N7H5 531 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 PJA1Q8NG27 643 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 PIP4K2CQ8TBX8 421 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 RMDN1Q96DB5 314 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 ECHDC3Q96DC8 303 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 LRIG1Q96JA1 1093 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 FEM1CQ96JP0 617 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 MKRN2Q9H000 416 aaKnown RBP6.9□□□□□ -1.3
SCAF4-204ENST00000467731 CD248Q9HCU0 757 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 RAB21Q9UL25 225 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 PPM1HQ9ULR3 514 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 MMP17Q9ULZ9 603 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 ARIH1Q9Y4X5 557 aaPredicted RBP6.9□□□□□ -1.3
SCAF4-204ENST00000467731 LRRK1Q38SD2 2015 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 LAMA1P25391 3075 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 ANKRD66B4E2M5 251 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 ALOX15BO15296 676 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 BANF1O75531 89 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 NDST3O95803 873 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 EPOP01588 193 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 PRNPP04156 253 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 PRKCGP05129 697 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 HLA-DPA1P20036 260 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 SLC8A1P32418 973 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 MAGEA3P43357 314 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 COPAP53621 1224 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 SIGLEC14Q08ET2 396 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 HSF5Q4G112 596 aaPredicted RBP6.9□□□□□ -1.3
SCAF4-204ENST00000467731 MSS51Q4VC12 460 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 SIRPB2Q5JXA9 342 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 CFAP58Q5T655 872 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 WLSQ5T9L3 541 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 DENND2CQ68D51 928 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 TMEM92Q6UXU6 159 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 CCNI2Q6ZMN8 369 aaPredicted RBP6.9□□□□□ -1.3
SCAF4-204ENST00000467731 TRIM67Q6ZTA4 783 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 CCDC25Q86WR0 208 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 SYNPOQ8N3V7 929 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 ZCCHC9Q8N567 271 aaKnown RBP6.9□□□□□ -1.3
SCAF4-204ENST00000467731 LPCAT1Q8NF37 534 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 FLCNQ8NFG4 579 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 B4GALNT2Q8NHY0 566 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 FAM81AQ8TBF8 368 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 ZNF641Q96N77 438 aaPredicted RBP6.9□□□□□ -1.3
SCAF4-204ENST00000467731 SMIM14Q96QK8 99 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 NELL2Q99435 816 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 OSBPL1AQ9BXW6 950 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 FAM129AQ9BZQ8 928 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 XAB2Q9HCS7 855 aaKnown RBP6.9□□□□□ -1.3
SCAF4-204ENST00000467731 CASS4Q9NQ75 786 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 MTRF1LQ9UGC7 380 aaKnown RBP6.9□□□□□ -1.3
SCAF4-204ENST00000467731 TRPM6Q9BX84 2022 aa6.9□□□□□ -1.3
SCAF4-204ENST00000467731 DCXO43602 365 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 PDGFBP01127 241 aaPredicted RBP6.9□□□□□ -1.31
SCAF4-204ENST00000467731 FGF1P05230 155 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 FAM153BP0C7A2 387 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 PIRTP0C851 137 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 TPH1P17752 444 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 MCM3P25205 808 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 RANBP1P43487 201 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 PSMD8P48556 350 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 EPHB1P54762 984 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 SESN2P58004 480 aaPredicted RBP6.9□□□□□ -1.31
SCAF4-204ENST00000467731 CRADDP78560 199 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 FASTKD3Q14CZ7 662 aaKnown RBP6.9□□□□□ -1.31
SCAF4-204ENST00000467731 PTPRRQ15256 657 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 CRY1Q16526 586 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 FAM153CQ494X1 144 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 ZNF805Q5CZA5 627 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 LRRC73Q5JTD7 316 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 EOGTQ5NDL2 527 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 HP1BP3Q5SSJ5 553 aaPredicted RBP6.9□□□□□ -1.31
SCAF4-204ENST00000467731 CERCAMQ5T4B2 595 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 DSG4Q86SJ6 1040 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 PDIK1LQ8N165 341 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms