RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 HEXIM1O94992 359 aaKnown RBP11.1□□□□□ -0.63
MSH5-212ENST00000467319 TRBC1P01850 177 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 WNT1P04628 370 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 ATP1A1P05023 1023 aaKnown RBP11.1□□□□□ -0.63
MSH5-212ENST00000467319 ENGP17813 658 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 XPAP23025 273 aaPredicted RBP11.1□□□□□ -0.63
MSH5-212ENST00000467319 VIPR1P32241 457 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 CXCR5P32302 372 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 LIG3P49916 1009 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 LIMK1P53667 647 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 IRX4P78413 519 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 ITKQ08881 620 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 CNGA3Q16281 694 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 KDELC1Q6UW63 502 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 KYAT3Q6YP21 454 aaKnown RBP11.1□□□□□ -0.63
MSH5-212ENST00000467319 USP45Q70EL2 814 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 CBARPQ8N350 705 aaPredicted RBP11.1□□□□□ -0.63
MSH5-212ENST00000467319 RASGEF1CQ8N431 466 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.1□□□□□ -0.63
MSH5-212ENST00000467319 C12orf50Q8NA57 414 aaPredicted RBP11.1□□□□□ -0.63
MSH5-212ENST00000467319 SPATA22Q8NHS9 363 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 PDCD6IPQ8WUM4 868 aaKnown RBP11.1□□□□□ -0.63
MSH5-212ENST00000467319 SCRN2Q96FV2 425 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 FEM1CQ96JP0 617 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 LENG8Q96PV6 779 aaPredicted RBP11.1□□□□□ -0.63
MSH5-212ENST00000467319 EDEM2Q9BV94 578 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 SLC17A9Q9BYT1 436 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 ZDHHC5Q9C0B5 715 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 PCDH9Q9HC56 1237 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 FZD3Q9NPG1 666 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 FSCN3Q9NQT6 498 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 DNPEPQ9ULA0 475 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 TTC7AQ9ULT0 858 aaPredicted RBP11.1□□□□□ -0.63
MSH5-212ENST00000467319 PHTF1Q9UMS5 762 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 ZKSCAN5Q9Y2L8 839 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 CACNA1AO00555 2505 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 SCN8AQ9UQD0 1980 aa11.1□□□□□ -0.63
MSH5-212ENST00000467319 C5orf60A6NFR6 353 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 PSMD11O00231 422 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 CES2O00748 559 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 ARHGAP33O14559 1287 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 SLC31A1O15431 190 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 KCNN4O15554 427 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 MMP20O60882 483 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 STK10O94804 968 aaKnown RBP11.09□□□□□ -0.63
MSH5-212ENST00000467319 MT-CYBP00156 380 aaPredicted RBP11.09□□□□□ -0.63
MSH5-212ENST00000467319 FGGP02679 453 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 ALPIP09923 528 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 ATXN1LP0C7T5 689 aaKnown RBP11.09□□□□□ -0.63
MSH5-212ENST00000467319 MSNP26038 577 aaKnown RBP11.09□□□□□ -0.63
MSH5-212ENST00000467319 CD38P28907 300 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 AKT2P31751 481 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 IGFALSP35858 605 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 CTSKP43235 329 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 CSNK1EP49674 416 aaKnown RBP11.09□□□□□ -0.63
MSH5-212ENST00000467319 GDF10P55107 478 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 SEMG2Q02383 582 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 OVGP1Q12889 678 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 PTPRRQ15256 657 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 TEAD4Q15561 434 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 QPCTQ16769 361 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 ANKRD20A2Q5SQ80 823 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 ANKRD20A1Q5TYW2 823 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 ANKRD20A3Q5VUR7 823 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 ITPRIPL1Q6GPH6 555 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 DRICH1Q6PGQ1 229 aaPredicted RBP11.09□□□□□ -0.63
MSH5-212ENST00000467319 DARS2Q6PI48 645 aaKnown RBP11.09□□□□□ -0.63
MSH5-212ENST00000467319 LIPIQ6XZB0 460 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 KIAA2013Q8IYS2 634 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 FAM71DQ8N9W8 422 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 MFSD2AQ8NA29 543 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 TP53I13Q8NBR0 393 aaPredicted RBP11.09□□□□□ -0.63
MSH5-212ENST00000467319 LPCAT1Q8NF37 534 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 CXorf40AQ8TE69 158 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 KLK6Q92876 244 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 CENPTQ96BT3 561 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 COQ10AQ96MF6 247 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 SMIM14Q96QK8 99 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 WDR24Q96S15 920 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 NUSAP1Q9BXS6 441 aaKnown RBP11.09□□□□□ -0.63
MSH5-212ENST00000467319 RSPH14Q9UHP6 348 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 SNX12Q9UMY4 172 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 CHKBQ9Y259 395 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 CA5BQ9Y2D0 317 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 BPTFQ12830 3046 aa11.09□□□□□ -0.63
MSH5-212ENST00000467319 TMEM131Q92545 1883 aa11.08□□□□□ -0.64
MSH5-212ENST00000467319 ADAMTS9Q9P2N4 1935 aa11.08□□□□□ -0.64
MSH5-212ENST00000467319 A0A1B0GVT2 93 aa11.08□□□□□ -0.64
MSH5-212ENST00000467319 H0Y8X5 98 aa11.08□□□□□ -0.64
MSH5-212ENST00000467319 CDX4O14627 284 aaPredicted RBP11.08□□□□□ -0.64
MSH5-212ENST00000467319 CEP104O60308 925 aa11.08□□□□□ -0.64
MSH5-212ENST00000467319 GDF9O60383 454 aa11.08□□□□□ -0.64
MSH5-212ENST00000467319 GCATO75600 419 aa11.08□□□□□ -0.64
MSH5-212ENST00000467319 TM7SF2O76062 418 aa11.08□□□□□ -0.64
MSH5-212ENST00000467319 NDST3O95803 873 aa11.08□□□□□ -0.64
MSH5-212ENST00000467319 EPOP01588 193 aa11.08□□□□□ -0.64
MSH5-212ENST00000467319 ITGAVP06756 1048 aa11.08□□□□□ -0.64
MSH5-212ENST00000467319 ELFN1P0C7U0 828 aa11.08□□□□□ -0.64
MSH5-212ENST00000467319 NFKBIAP25963 317 aa11.08□□□□□ -0.64
MSH5-212ENST00000467319 PSMB4P28070 264 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms