RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 SPATA22Q8NHS9 363 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 IMP4Q96G21 291 aaKnown RBP12.45□□□□□ -0.42
CHPF2-202ENST00000465601 SMIM14Q96QK8 99 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 EDEM2Q9BV94 578 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 TDRD1Q9BXT4 1180 aaKnown RBP12.45□□□□□ -0.42
CHPF2-202ENST00000465601 CARD9Q9H257 536 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 KLHL8Q9P2G9 620 aaPredicted RBP12.45□□□□□ -0.42
CHPF2-202ENST00000465601 B4GALT6Q9UBX8 382 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 ANKRD6Q9Y2G4 727 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 COQ6Q9Y2Z9 468 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 DNAH14Q0VDD8 3507 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 GOLGA8CPA6NN73 597 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 CDX4O14627 284 aaPredicted RBP12.44□□□□□ -0.42
CHPF2-202ENST00000465601 VILLO15195 856 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 KCNN4O15554 427 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 LZTS3O60299 673 aaPredicted RBP12.44□□□□□ -0.42
CHPF2-202ENST00000465601 CEP104O60308 925 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 TM7SF2O76062 418 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 MT-CYBP00156 380 aaPredicted RBP12.44□□□□□ -0.42
CHPF2-202ENST00000465601 PRLP01236 227 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 NFKB1P19838 968 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 ATXN3P54252 364 aaPredicted RBP12.44□□□□□ -0.42
CHPF2-202ENST00000465601 EPHB1P54762 984 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 CLDN2P57739 230 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 RALGDSQ12967 914 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 KIF19Q2TAC6 998 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 LIPIQ6XZB0 460 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 DPPA4Q7L190 304 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 TMEM145Q8NBT3 493 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 ATG4AQ8WYN0 398 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 SPOCK2Q92563 424 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 VAT1Q99536 393 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 FERMT1Q9BQL6 677 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 USP29Q9HBJ7 922 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 PCDH9Q9HC56 1237 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 UBP1Q9NZI7 540 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 TRHDEQ9UKU6 1024 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 DNPEPQ9ULA0 475 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 JRKLQ9Y4A0 524 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 SNX11Q9Y5W9 270 aa12.44□□□□□ -0.42
CHPF2-202ENST00000465601 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.44□□□□□ -0.42
CHPF2-202ENST00000465601 A0A0U1RQS6 177 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 C4orf47A7E2U8 309 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 H0Y8X5 98 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 TLR4O00206 839 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 KIF5CO60282 957 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 PMPCBO75439 489 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 ALPIP09923 528 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 CYP2A6P11509 494 aaPredicted RBP12.43□□□□□ -0.42
CHPF2-202ENST00000465601 C6P13671 934 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 CA4P22748 312 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 VIPR1P32241 457 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 C21orf59P57076 290 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 ARHGAP8P85298 464 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 PCSK7Q16549 785 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 PRAMEF14Q5SWL7 426 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 STPG1Q5TH74 334 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 DENND2CQ68D51 928 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 ZSCAN30Q86W11 494 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 NDUFAF2Q8N183 169 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 MFSD2AQ8NA29 543 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 LPCAT1Q8NF37 534 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 SLC35B2Q8TB61 432 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 C1orf54Q8WWF1 131 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 ASB12Q8WXK4 309 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 SKA1Q96BD8 255 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 TADA1Q96BN2 335 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 SCRN2Q96FV2 425 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 KLHDC7BQ96G42 594 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 BMFQ96LC9 184 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 LENG8Q96PV6 779 aaPredicted RBP12.43□□□□□ -0.42
CHPF2-202ENST00000465601 KLF6Q99612 283 aaPredicted RBP12.43□□□□□ -0.42
CHPF2-202ENST00000465601 ZDHHC5Q9C0B5 715 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 TMEM9BQ9NQ34 198 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 RSPH14Q9UHP6 348 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 PPIL1Q9Y3C6 166 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 HS3ST3A1Q9Y663 406 aa12.43□□□□□ -0.42
CHPF2-202ENST00000465601 A0A0J9YYE9 177 aa12.42□□□□□ -0.42
CHPF2-202ENST00000465601 CFAP69A5D8W1 941 aa12.42□□□□□ -0.42
CHPF2-202ENST00000465601 POM121BA6NF01 834 aa12.42□□□□□ -0.42
CHPF2-202ENST00000465601 NPIPB15A6NHN6 443 aaPredicted RBP12.42□□□□□ -0.42
CHPF2-202ENST00000465601 STK10O94804 968 aaKnown RBP12.42□□□□□ -0.42
CHPF2-202ENST00000465601 HEXIM1O94992 359 aaKnown RBP12.42□□□□□ -0.42
CHPF2-202ENST00000465601 TRBC1P01850 177 aa12.42□□□□□ -0.42
CHPF2-202ENST00000465601 FGGP02679 453 aa12.42□□□□□ -0.42
CHPF2-202ENST00000465601 ATP1A1P05023 1023 aaKnown RBP12.42□□□□□ -0.42
CHPF2-202ENST00000465601 ELFN1P0C7U0 828 aa12.42□□□□□ -0.42
CHPF2-202ENST00000465601 NFKBIAP25963 317 aa12.42□□□□□ -0.42
CHPF2-202ENST00000465601 HNF1BP35680 557 aa12.42□□□□□ -0.42
CHPF2-202ENST00000465601 CTSKP43235 329 aa12.42□□□□□ -0.42
CHPF2-202ENST00000465601 RPL26P61254 145 aaKnown RBP12.42□□□□□ -0.42
CHPF2-202ENST00000465601 CDK18Q07002 472 aa12.42□□□□□ -0.42
CHPF2-202ENST00000465601 SNX1Q13596 522 aa12.42□□□□□ -0.42
CHPF2-202ENST00000465601 GALNT3Q14435 633 aa12.42□□□□□ -0.42
CHPF2-202ENST00000465601 CNGA3Q16281 694 aa12.42□□□□□ -0.42
CHPF2-202ENST00000465601 QPCTQ16769 361 aa12.42□□□□□ -0.42
CHPF2-202ENST00000465601 RSPO4Q2I0M5 234 aaPredicted RBP12.42□□□□□ -0.42
CHPF2-202ENST00000465601 HLA-BQ31612 363 aa12.42□□□□□ -0.42
CHPF2-202ENST00000465601 UAP1L1Q3KQV9 507 aa12.42□□□□□ -0.42
CHPF2-202ENST00000465601 ANKRD20A2Q5SQ80 823 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms