RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 PPP1R3AQ16821 1122 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 MFSD14CQ5VZR4 134 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 MSANTD2Q6P1R3 559 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 MARVELD2Q8N4S9 558 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 ZFAND2BQ8WV99 257 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 KLHL32Q96NJ5 620 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 RGS18Q9NS28 235 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 TRAF6Q9Y4K3 522 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 PCDHGA7Q9Y5G6 932 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 TLL2Q9Y6L7 1015 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 TTC24A2A3L6 582 aaPredicted RBP18.39■□□□□ 0.53
SYNE4-204ENST00000465425 MROH6A6NGR9 719 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 ASGR1P07306 291 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 IMPDH1P20839 514 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 ETFBP38117 255 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 SLC26A3P40879 764 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 GPR15P49685 360 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 ARSDP51689 593 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 CDKN2DP55273 166 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 NFE2Q16621 373 aaPredicted RBP18.39■□□□□ 0.53
SYNE4-204ENST00000465425 SIRPB2Q5JXA9 342 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 CWF19L1Q69YN2 538 aaKnown RBP18.39■□□□□ 0.53
SYNE4-204ENST00000465425 FAM45BPQ6NSW5 357 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 LILRA2Q8N149 483 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 FAM45AQ8TCE6 357 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 UNC93B1Q9H1C4 597 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 CACNA2D2Q9NY47 1150 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 CRYL1Q9Y2S2 319 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 TTC3P53804 2025 aa18.39■□□□□ 0.53
SYNE4-204ENST00000465425 PRSS51A0A1B0GVH4 220 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 OR51F1A6NGY5 319 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 KIF3CO14782 793 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 DNAJA2O60884 412 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 TRPA1O75762 1119 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 GRK4P32298 578 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 TRIM25Q14258 630 aaKnown RBP18.38■□□□□ 0.53
SYNE4-204ENST00000465425 EML3Q32P44 896 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 CNPY1Q3B7I2 92 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 REP15Q6BDI9 236 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 GLB1LQ6UWU2 654 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 ZNF683Q8IZ20 524 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 FUBP3Q96I24 572 aaKnown RBP eCLIP18.38■□□□□ 0.53
SYNE4-204ENST00000465425 BTN2A3PQ96KV6 586 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 PKP2Q99959 881 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 ZCWPW1Q9H0M4 648 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 GSTO2Q9H4Y5 243 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 GMIPQ9P107 970 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 SUCOQ9UBS9 1254 aaKnown RBP18.38■□□□□ 0.53
SYNE4-204ENST00000465425 AP4B1Q9Y6B7 739 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 MYO16Q9Y6X6 1858 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 AP1G1O43747 822 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 RAMP2O60895 175 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 S1PR4O95977 384 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 SLC4A1P02730 911 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 SNRPB2P08579 225 aaKnown RBP18.38■□□□□ 0.53
SYNE4-204ENST00000465425 ARSAP15289 507 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 HSPA13P48723 471 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 INHBCP55103 352 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 POLD3Q15054 466 aaPredicted RBP18.38■□□□□ 0.53
SYNE4-204ENST00000465425 CLEC6AQ6EIG7 209 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 MIB1Q86YT6 1006 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 SLC25A23Q9BV35 468 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 UPF3AQ9H1J1 476 aaKnown RBP18.38■□□□□ 0.53
SYNE4-204ENST00000465425 SPAG4Q9NPE6 437 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 TBC1D30Q9Y2I9 924 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 MIA3Q5JRA6 1907 aa18.38■□□□□ 0.53
SYNE4-204ENST00000465425 E7ENX8 843 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 CRTAMO95727 393 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 STX1BP61266 288 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 ZNF678Q5SXM1 525 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 CST9Q5W186 159 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 RAP1GAP2Q684P5 730 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 PIM3Q86V86 326 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 ZNF280BQ86YH2 543 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 RASAL3Q86YV0 1011 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 OR52K2Q8NGK3 314 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 EXT2Q93063 718 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 C8orf48Q96LL4 319 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 ZFYVE28Q9HCC9 887 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 MARCH4Q9P2E8 410 aaPredicted RBP18.37■□□□□ 0.53
SYNE4-204ENST00000465425 OAZ2O95190 189 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 GLP2RO95838 553 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 MT-CO1P00395 513 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 PABPC4LP0CB38 370 aaKnown RBP18.37■□□□□ 0.53
SYNE4-204ENST00000465425 TSPAN8P19075 237 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 OR1G1P47890 313 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 USP46P62068 366 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 LRP8Q14114 963 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 GEN1Q17RS7 908 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 FBXL22Q6P050 247 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 TMEM207Q6UWW9 146 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 ISCA2Q86U28 154 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 ZNF598Q86UK7 904 aaKnown RBP18.37■□□□□ 0.53
SYNE4-204ENST00000465425 RYBPQ8N488 228 aaPredicted RBP18.37■□□□□ 0.53
SYNE4-204ENST00000465425 GALNT4Q8N4A0 578 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 TEX26Q8N6G2 289 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 HMGCLL1Q8TB92 370 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 BLOC1S5Q8TDH9 187 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 CNBD2Q96M20 576 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 TBATAQ96M53 351 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms