RNA–Protein interactions for RNA: ENST00000463634.6

PRPF4B-203, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 2,590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-203ENST00000463634 OXCT1P55809 520 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 SLC25A3Q00325 362 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 TSNAXIP1Q2TAA8 658 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 TMEM207Q6UWW9 146 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 RPS27LQ71UM5 84 aaKnown RBP8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 DIS3LQ8TF46 1054 aaKnown RBP8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 FAM136AQ96C01 138 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 TRIB3Q96RU7 358 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 CYP2S1Q96SQ9 504 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 MRPL57Q9BQC6 102 aaKnown RBP8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 MGME1Q9BQP7 344 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 CINPQ9BW66 212 aaPredicted RBP8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 NUF2Q9BZD4 464 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 MMADHCQ9H3L0 296 aaPredicted RBP8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 POMKQ9H5K3 350 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 UBA2Q9UBT2 640 aaPredicted RBP8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 C15orf41Q9Y2V0 281 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 SPO11Q9Y5K1 396 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 CHD5Q8TDI0 1954 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 GRID2O43424 1007 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 CLDN11O75508 207 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 KRT36O76013 467 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 SOD2P04179 222 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 RHOCP08134 193 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 RPSAP08865 295 aaKnown RBP8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 TFEBP19484 476 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 DNAJB1P25685 340 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 GCKP35557 465 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 DEFB103AP81534 67 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 TWF1Q12792 350 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 MTA1Q13330 715 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 PDCD2Q16342 344 aaPredicted RBP8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 FAM83EQ2M2I3 478 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 TECRLQ5HYJ1 363 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 GPR158Q5T848 1215 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 FAM219BQ5XKK7 198 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 SEL1L3Q68CR1 1132 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 ALG1LQ6GMV1 187 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 KLHDC10Q6PID8 442 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 LINGO4Q6UY18 593 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 ENDOVQ8N8Q3 282 aaKnown RBP8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 OVCA2Q8WZ82 227 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 BHMTQ93088 406 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 PLD4Q96BZ4 506 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 ZNF599Q96NL3 588 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 PSKH2Q96QS6 385 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 SLC22A12Q96S37 553 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 TCF7L2Q9NQB0 619 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 BATF3Q9NR55 127 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 SEPT3Q9UH03 358 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 G3BP2Q9UN86 482 aaKnown RBP8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 RPL26L1Q9UNX3 145 aaKnown RBP8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 ATP11BQ9Y2G3 1177 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 VWA7Q9Y334 891 aa8.12□□□□□ -1.11
PRPF4B-203ENST00000463634 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 PRRG1O14668 218 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 HDAC3O15379 428 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 CD3EAPO15446 510 aaKnown RBP8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 KDELR3O43731 214 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 TM7SF2O76062 418 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 SNUPNO95149 360 aaKnown RBP8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 NDST3O95803 873 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 PDHA1P08559 390 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 SPATA31D3P0C874 917 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 MYL4P12829 197 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 HNRNPLP14866 589 aaKnown RBP eCLIP8.11□□□□□ -1.116e-7■■■□□ 17.5
PRPF4B-203ENST00000463634 GNAZP19086 355 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 COPAP53621 1224 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 SESN3P58005 492 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 ACVR1Q04771 509 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 PRKAA1Q13131 559 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 ZNF177Q13360 481 aaPredicted RBP8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 PTPRRQ15256 657 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 RCN1Q15293 331 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 FSCBQ5H9T9 825 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 RALGPS1Q5JS13 557 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 ADGRF1Q5T601 910 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 RNF219Q5W0B1 726 aaPredicted RBP8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 CXorf57Q6NSI4 855 aaKnown RBP8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 ZNF549Q6P9A3 640 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 TRIM67Q6ZTA4 783 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 SPATA31D4Q6ZUB0 917 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 TMEM150AQ86TG1 271 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 SCUBE1Q8IWY4 988 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 ULK2Q8IYT8 1036 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 BRSK1Q8TDC3 778 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 RMDN1Q96DB5 314 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 TMEM169Q96HH4 297 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 UBXN10Q96LJ8 280 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 MYRFLQ96LU7 910 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 CEP295NLQ96MC4 621 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 KLF16Q9BXK1 252 aaPredicted RBP8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 MUC3BQ9H195 1237 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 TRPC7Q9HCX4 862 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 PCDHGC4Q9Y5F7 938 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 A0A0U1RQS6 177 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 A0A1B0GVM2 712 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 TCAF2A6NFQ2 919 aa8.11□□□□□ -1.11
PRPF4B-203ENST00000463634 A8MT66 165 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms