RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 FPGTO14772 594 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 PPP1R12AO14974 1030 aaPredicted RBP17.44■□□□□ 0.38
USP39-208ENST00000455732 MMP20O60882 483 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 PROS1P07225 676 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 ATXN1LP0C7T5 689 aaKnown RBP17.44■□□□□ 0.38
USP39-208ENST00000455732 C6P13671 934 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 TGM2P21980 687 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 CTNNA2P26232 953 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 RABIFP47224 123 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 CLDN2P57739 230 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 KIF5AQ12840 1032 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 TRAF2Q12933 501 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 RALGDSQ12967 914 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 BNIP3Q12983 259 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 INAVAQ3KP66 663 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 DPPA4Q7L190 304 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 BZW1Q7L1Q6 419 aaKnown RBP17.44■□□□□ 0.38
USP39-208ENST00000455732 SLC22A18ASQ8N1D0 253 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 CCNYQ8ND76 341 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 CENPTQ96BT3 561 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 IL12RB2Q99665 862 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 SEMA3CQ99985 751 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 DESI2Q9BSY9 194 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 WRAP53Q9BUR4 548 aaKnown RBP17.44■□□□□ 0.38
USP39-208ENST00000455732 KLK13Q9UKR3 277 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 APOBEC2Q9Y235 224 aaKnown RBP17.44■□□□□ 0.38
USP39-208ENST00000455732 PCDHGC4Q9Y5F7 938 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 PCDHA3Q9Y5H8 950 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 CCDC66A2RUB6 948 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 POM121BA6NF01 834 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 TOR1BO14657 336 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 TNFSF14O43557 240 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 CST8O60676 142 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 PGLSO95336 258 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 CPP00450 1065 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 HLA-DQB2P05538 268 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 ITGAVP06756 1048 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 LIG3P49916 1009 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 NAP1L1P55209 391 aaKnown RBP17.43■□□□□ 0.38
USP39-208ENST00000455732 PFN3P60673 137 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 COPS2P61201 443 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 NPNTQ6UXI9 565 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 PTAR1Q7Z6K3 402 aaPredicted RBP17.43■□□□□ 0.38
USP39-208ENST00000455732 TP53I13Q8NBR0 393 aaPredicted RBP17.43■□□□□ 0.38
USP39-208ENST00000455732 CCDC112Q8NEF3 446 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 KIAA1524Q8TCG1 905 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 GATA6Q92908 595 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 IFT43Q96FT9 208 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 PHTF1Q9UMS5 762 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 MSRB2Q9Y3D2 182 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 CHD6Q8TD26 2715 aa17.43■□□□□ 0.38
USP39-208ENST00000455732 KCNK1O00180 336 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 ARHGAP6O43182 974 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 FZD6O60353 706 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 NEBLO76041 1014 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 KRT10P13645 584 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 NFKBIAP25963 317 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 PTPN7P35236 360 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 IGFALSP35858 605 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 DYNLT1P63172 113 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 ZBTB17Q13105 803 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 ARMC12Q5T9G4 340 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 Q6ZSR6 202 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 PAF1Q8N7H5 531 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 ARRDC2Q8TBH0 407 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 LRRN4Q8WUT4 740 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 MCCC1Q96RQ3 725 aaPredicted RBP17.42■□□□□ 0.38
USP39-208ENST00000455732 EFR3BQ9Y2G0 817 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 PPIL1Q9Y3C6 166 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 RAI2Q9Y5P3 530 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 WDFY3Q8IZQ1 3526 aa17.42■□□□□ 0.38
USP39-208ENST00000455732 C1QTNF9BB2RNN3 333 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 JCHAINP01591 159 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 PRKCGP05129 697 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 C1QTNF9P0C862 333 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 PECAM1P16284 738 aaPredicted RBP17.41■□□□□ 0.38
USP39-208ENST00000455732 PEX5P50542 639 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 DSC2Q02487 901 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 ADCY2Q08462 1091 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 ITKQ08881 620 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 AP1B1Q10567 949 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 IHHQ14623 411 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 PRKD1Q15139 912 aaPredicted RBP17.41■□□□□ 0.38
USP39-208ENST00000455732 LIPIQ6XZB0 460 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 BBS12Q6ZW61 710 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 NT5DC3Q86UY8 548 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 CCDC50Q8IVM0 306 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 SYCE1Q8N0S2 351 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 CNTD1Q8N815 330 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 PDCD6IPQ8WUM4 868 aaKnown RBP17.41■□□□□ 0.38
USP39-208ENST00000455732 TDRD1Q9BXT4 1180 aaKnown RBP17.41■□□□□ 0.38
USP39-208ENST00000455732 B4GALT6Q9UBX8 382 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 TRIM10Q9UDY6 481 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 FTSJ1Q9UET6 329 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 ADGRG1Q9Y653 693 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 MYLKQ15746 1914 aa17.41■□□□□ 0.38
USP39-208ENST00000455732 A0A0U1RQJ8 604 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 SPTY2D1-AS1A0A0U1RR47 76 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 MACROD2A1Z1Q3 448 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 ELFN1P0C7U0 828 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms