RNA–Protein interactions for RNA: ENST00000454960.1

BRPF3-207, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 3

Gene BRPF3, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-207ENST00000454960 CSPG4P5Q96PW8 444 aa9.36□□□□□ -0.91
BRPF3-207ENST00000454960 EIF3CQ99613 913 aaKnown RBP9.36□□□□□ -0.91
BRPF3-207ENST00000454960 WRAP53Q9BUR4 548 aaKnown RBP9.36□□□□□ -0.91
BRPF3-207ENST00000454960 SLC17A9Q9BYT1 436 aa9.36□□□□□ -0.91
BRPF3-207ENST00000454960 ABCG4Q9H172 646 aa9.36□□□□□ -0.91
BRPF3-207ENST00000454960 ZWILCHQ9H900 591 aa9.36□□□□□ -0.91
BRPF3-207ENST00000454960 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.36□□□□□ -0.91
BRPF3-207ENST00000454960 KLHL11Q9NVR0 708 aa9.36□□□□□ -0.91
BRPF3-207ENST00000454960 KLF15Q9UIH9 416 aa9.36□□□□□ -0.91
BRPF3-207ENST00000454960 ANAPC7Q9UJX3 599 aa9.36□□□□□ -0.91
BRPF3-207ENST00000454960 SSUH2Q9Y2M2 353 aa9.36□□□□□ -0.91
BRPF3-207ENST00000454960 DOPEY1Q5JWR5 2465 aa9.36□□□□□ -0.91
BRPF3-207ENST00000454960 ANKRD17O75179 2603 aaKnown RBP9.35□□□□□ -0.91
BRPF3-207ENST00000454960 LY6G6EA0A0G2JKS1 128 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 TTC24A2A3L6 582 aaPredicted RBP9.35□□□□□ -0.91
BRPF3-207ENST00000454960 NEMP2A6NFY4 417 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 ARHGAP42A6NI28 874 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 ENO4A6NNW6 628 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 TSPAN6O43657 245 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 MMP20O60882 483 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 PIAS2O75928 621 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 CD48P09326 243 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 ALPPL2P10696 532 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 NME1P15531 152 aaKnown RBP9.35□□□□□ -0.91
BRPF3-207ENST00000454960 TIMP2P16035 220 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 ITGB6P18564 788 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 AMPD1P23109 780 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 DGKAP23743 735 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 HNRNPH3P31942 346 aaKnown RBP9.35□□□□□ -0.91
BRPF3-207ENST00000454960 MMP12P39900 470 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 RP1P56715 2156 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 PFN3P60673 137 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 RAD51Q06609 339 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 RALGDSQ12967 914 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 MMRN1Q13201 1228 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 CLN3Q13286 438 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 IRF4Q15306 451 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 ASTE1Q2TB18 679 aaPredicted RBP9.35□□□□□ -0.91
BRPF3-207ENST00000454960 KCTD16Q68DU8 428 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 HIST2H2BCQ6DN03 193 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 USP53Q70EK8 1073 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 POLNQ7Z5Q5 900 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 VPS36Q86VN1 386 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 PARGQ86W56 976 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 CAMK1DQ8IU85 385 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 RBFAQ8N0V3 343 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 TP53I13Q8NBR0 393 aaPredicted RBP9.35□□□□□ -0.91
BRPF3-207ENST00000454960 DENND6BQ8NEG7 585 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 ZNF548Q8NEK5 533 aaPredicted RBP9.35□□□□□ -0.91
BRPF3-207ENST00000454960 CENPTQ96BT3 561 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 DNAJC7Q99615 494 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 NCAPGQ9BPX3 1015 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 TCEAL2Q9H3H9 227 aaPredicted RBP9.35□□□□□ -0.91
BRPF3-207ENST00000454960 SP110Q9HB58 689 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 PCDH18Q9HCL0 1135 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 MRPL47Q9HD33 250 aaKnown RBP9.35□□□□□ -0.91
BRPF3-207ENST00000454960 PCDH12Q9NPG4 1184 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 MBNL1Q9NR56 388 aaKnown RBP9.35□□□□□ -0.91
BRPF3-207ENST00000454960 DKK3Q9UBP4 350 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 SRPK3Q9UPE1 567 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 COQ6Q9Y2Z9 468 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 LUC7L2Q9Y383 392 aaKnown RBP9.35□□□□□ -0.91
BRPF3-207ENST00000454960 HS3ST3A1Q9Y663 406 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 BZW2Q9Y6E2 419 aaKnown RBP9.35□□□□□ -0.91
BRPF3-207ENST00000454960 U3KQA8 63 aa9.35□□□□□ -0.91
BRPF3-207ENST00000454960 SPTY2D1-AS1A0A0U1RR47 76 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 PMS2P1A4D2B8 440 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 H3BM21 787 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 H3BRJ5 948 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 NEMP1O14524 444 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 DAPK3O43293 454 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 MFSD11O43934 449 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 PALMO75781 387 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 NEBLO76041 1014 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 GM2AP17900 193 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 IL4RP24394 825 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 GJC1P36383 396 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 EIF4A3P38919 411 aaKnown RBP9.34□□□□□ -0.91
BRPF3-207ENST00000454960 HCAR3P49019 387 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 DUSP3P51452 185 aaPredicted RBP9.34□□□□□ -0.91
BRPF3-207ENST00000454960 ARSEP51690 589 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 TAS2R40P59535 323 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 IL10RBQ08334 325 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 SLC10A7Q0GE19 358 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 EIF2B5Q13144 721 aaKnown RBP9.34□□□□□ -0.91
BRPF3-207ENST00000454960 SGCGQ13326 291 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 ZNF211Q13398 564 aaPredicted RBP9.34□□□□□ -0.91
BRPF3-207ENST00000454960 PDE1CQ14123 709 aaPredicted RBP9.34□□□□□ -0.91
BRPF3-207ENST00000454960 PIGHQ14442 188 aaPredicted RBP9.34□□□□□ -0.91
BRPF3-207ENST00000454960 TMEM52BQ4KMG9 183 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 CCDC122Q5T0U0 273 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 ALKBH5Q6P6C2 394 aaKnown RBP9.34□□□□□ -0.91
BRPF3-207ENST00000454960 TTC7BQ86TV6 843 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 VSTM4Q8IW00 320 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 PGBD5Q8N414 524 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 RNF214Q8ND24 703 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 ZNF564Q8TBZ8 553 aaPredicted RBP9.34□□□□□ -0.91
BRPF3-207ENST00000454960 TEKT4Q8WW24 435 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 ECHDC3Q96DC8 303 aa9.34□□□□□ -0.91
BRPF3-207ENST00000454960 IQCDQ96DY2 449 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms