RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.7■□□□□ 0.58
SHANK3-203ENST00000445220 ARRDC4Q8NCT1 418 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 WDR48Q8TAF3 677 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 SELENOMQ8WWX9 145 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 MRPS31Q92665 395 aaKnown RBP18.7■□□□□ 0.58
SHANK3-203ENST00000445220 ACP6Q9NPH0 428 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 PHF11Q9UIL8 331 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 RIC1Q4ADV7 1423 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 H6PDO95479 791 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 HNRNPLP14866 589 aaKnown RBP eCLIP18.69■□□□□ 0.581e-6■■■■□ 21.9
SHANK3-203ENST00000445220 TRIM32Q13049 653 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 GK5Q6ZS86 529 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 RBM4BQ9BQ04 359 aaKnown RBP18.69■□□□□ 0.58
SHANK3-203ENST00000445220 RBM4Q9BWF3 364 aaKnown RBP18.69■□□□□ 0.58
SHANK3-203ENST00000445220 FAM126AQ9BYI3 521 aaPredicted RBP18.69■□□□□ 0.58
SHANK3-203ENST00000445220 ABHD16BQ9H3Z7 469 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 KANSL3Q9P2N6 904 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 LYVE1Q9Y5Y7 322 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 ATP6AP2A0A1C7CYW4 349 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 GSAPA4D1B5 854 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 ATP6AP2O75787 350 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 TRUB2O95900 331 aaKnown RBP18.69■□□□□ 0.58
SHANK3-203ENST00000445220 SOX10P56693 466 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 EFEMP1Q12805 493 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 STARD3Q14849 445 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 RFWD3Q6PCD5 774 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 MEIOBQ8N635 442 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 CATSPERZQ9NTU4 200 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 PGRMC2O15173 223 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 MED8Q96G25 268 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 CENPNQ96H22 339 aaPredicted RBP18.69■□□□□ 0.58
SHANK3-203ENST00000445220 BTRCQ9Y297 605 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 NTRK1P04629 796 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 HPGDP15428 266 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 LY6KQ17RY6 165 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 SPPL2CQ8IUH8 684 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 STK40Q8N2I9 435 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 PHF12Q96QT6 1004 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 MNTQ99583 582 aa18.69■□□□□ 0.58
SHANK3-203ENST00000445220 TTYH1Q9H313 450 aaPredicted RBP18.69■□□□□ 0.58
SHANK3-203ENST00000445220 ASTN1O14525 1302 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 RPTORQ8N122 1335 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 ATF6P18850 670 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 PGBD2Q6P3X8 592 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 GLT6D1Q7Z4J2 308 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 OOSP2Q86WS3 158 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 CCDC185Q8N715 623 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 GSDMCQ9BYG8 508 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 RHOBTB2Q9BYZ6 727 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 KHDRBS3O75525 346 aaKnown RBP18.68■□□□□ 0.58
SHANK3-203ENST00000445220 KCTD8Q6ZWB6 473 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 PIK3R3Q92569 461 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 DNAJC19Q96DA6 116 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 NODALQ96S42 347 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 PREBQ9HCU5 417 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 TRPV5Q9NQA5 729 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 FAM50BQ9Y247 325 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 NR2E3Q9Y5X4 410 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 A0A0J9YYE9 177 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 SLC12A8A0AV02 714 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 BCKDKO14874 412 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 TSPAN3O60637 253 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 PSMD10O75832 226 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 ADGRE1Q14246 886 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 HKDC1Q2TB90 917 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 OR2T12Q8NG77 320 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 SNTG2Q9NY99 539 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 SLC22A3O75751 556 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 NFICP08651 508 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 TUBP50607 506 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 RALGDSQ12967 914 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 STXBP5Q5T5C0 1151 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 FAM117BQ6P1L5 589 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 ADGRD1Q6QNK2 874 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 PANX3Q96QZ0 392 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 PRDM8Q9NQV8 689 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 TAS2R1Q9NYW7 299 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 PLK2Q9NYY3 685 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 AKAP7Q9P0M2 348 aaPredicted RBP18.68■□□□□ 0.58
SHANK3-203ENST00000445220 VPS28Q9UK41 221 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 SNX6Q9UNH7 406 aa18.68■□□□□ 0.58
SHANK3-203ENST00000445220 CASKO14936 926 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 SLC9A4Q6AI14 798 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 ANO7Q6IWH7 933 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 EDEM1Q92611 657 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 MED28Q9H204 178 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 SETD4Q9NVD3 440 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 DDX43Q9NXZ2 648 aaKnown RBP18.67■□□□□ 0.58
SHANK3-203ENST00000445220 ATRNO75882 1429 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 ARHGEF33A8MVX0 844 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 CBX4O00257 560 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 MDM4O15151 490 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 ALDH1A2O94788 518 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 ANGPTL1O95841 491 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 UMPSP11172 480 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 PRG2P13727 222 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 SDC2P34741 201 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 ARL4DP49703 201 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 UGT2B15P54855 530 aa18.67■□□□□ 0.58
SHANK3-203ENST00000445220 TUBA3CQ13748 450 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms