RNA–Protein interactions for RNA: ENST00000441973.1

UBE2D3P4-201, Transcript of ubiquitin conjugating enzyme E2 D3 pseudogene 4, humanhuman

BASIC

Gene UBE2D3P4, Length 436 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P4-201ENST00000441973 HERPUD2Q9BSE4 406 aa4.13□□□□□ -1.75
UBE2D3P4-201ENST00000441973 SDF2L1Q9HCN8 221 aa4.13□□□□□ -1.75
UBE2D3P4-201ENST00000441973 HCN3Q9P1Z3 774 aa4.13□□□□□ -1.75
UBE2D3P4-201ENST00000441973 KIAA1456Q9P272 454 aa4.13□□□□□ -1.75
UBE2D3P4-201ENST00000441973 CDC14AQ9UNH5 594 aa4.13□□□□□ -1.75
UBE2D3P4-201ENST00000441973 PCDHAC2Q9Y5I4 1007 aa4.13□□□□□ -1.75
UBE2D3P4-201ENST00000441973 A0A1W2PS18 150 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 ERVV-2B6SEH9 535 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 MID1O15344 667 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 NDUFS7O75251 213 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 AFPP02771 609 aaKnown RBP4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 MMP2P08253 660 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 DDX5P17844 614 aaKnown RBP4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 ZNF132P52740 706 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 FOXD4Q12950 439 aaPredicted RBP4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 PPFIA1Q13136 1202 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 TAF11Q15544 211 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 EFNB3Q15768 340 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 NAA35Q5VZE5 725 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 PMS2CLQ68D20 193 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 SMIM29Q86T20 159 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 SFR1Q86XK3 245 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 KIAA2013Q8IYS2 634 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 SECTM1Q8WVN6 248 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 TRIM63Q969Q1 353 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 UHRF2Q96PU4 802 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 ARPC5LQ9BPX5 153 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 MXRA8Q9BRK3 442 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 PHF7Q9BWX1 381 aaPredicted RBP4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 MMP28Q9H239 520 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 C17orf75Q9HAS0 396 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 MCM9Q9NXL9 1143 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 PEMTQ9UBM1 199 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 CNOT7Q9UIV1 285 aaKnown RBP4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 KIF26BQ2KJY2 2108 aa4.12□□□□□ -1.75
UBE2D3P4-201ENST00000441973 A0A0G2JPF8 293 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 FAM172BPA6NC97 362 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 GOLGA6L9A6NEM1 432 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 PRR23AA6NEV1 266 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 GAGE10A6NGK3 116 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 HNRNPCL3B7ZW38 293 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 AKR1B15C9JRZ8 316 aaPredicted RBP4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 ZNF587BE7ETH6 402 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 TAF4O00268 1085 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 HNRNPCL1O60812 293 aaKnown RBP4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 PEX14O75381 377 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 HEXAP06865 529 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 HNRNPCL4P0DMR1 293 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 AGAP20933 346 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 PSMC2P35998 433 aaKnown RBP4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 CLDN2P57739 230 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 UBE3AQ05086 875 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 ZBTB17Q13105 803 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 HIST2H2ACQ16777 129 aaPredicted RBP4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 LRRC8DQ7L1W4 858 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 SATL1Q86VE3 508 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 ZNF441Q8N8Z8 693 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 ZCCHC10Q8TBK6 192 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 RUFY2Q8WXA3 655 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 PPM1EQ8WY54 764 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 ERGIC1Q969X5 290 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 FBXL8Q96CD0 374 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 ZSCAN31Q96LW9 406 aaPredicted RBP4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 EYA3Q99504 573 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 KXD1Q9BQD3 176 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 SPRY4Q9C004 299 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 CISD1Q9NZ45 108 aaKnown RBP4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 POU2F3Q9UKI9 436 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 ADAM18Q9Y3Q7 739 aa4.11□□□□□ -1.75
UBE2D3P4-201ENST00000441973 PLRG1O43660 514 aaKnown RBP4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 NBNO60934 754 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 CRYAAP02489 173 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 ETFAP13804 333 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 IL15P40933 162 aaPredicted RBP4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 NLRP5P59047 1200 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 BRWD1-AS2P59051 145 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 RBM39Q14498 530 aaKnown RBP4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 VEPH1Q14D04 833 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 STPG1Q5TH74 334 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 ATG16L1Q676U5 607 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 B3GNT6Q6ZMB0 384 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 CCNI2Q6ZMN8 369 aaPredicted RBP4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 LINGO2Q7L985 606 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 BEST2Q8NFU1 509 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 TMEM19Q96HH6 336 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 DUX3Q96PT4 197 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 SIN3AQ96ST3 1273 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 CSF3RQ99062 836 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 SH3GL2Q99962 352 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 PTPRHQ9HD43 1115 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 MKKSQ9NPJ1 570 aaPredicted RBP4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 RIC8AQ9NPQ8 531 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 SNTG1Q9NSN8 517 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 BEX4Q9NWD9 120 aaPredicted RBP4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 PCDHGB3Q9Y5G1 929 aa4.1□□□□□ -1.75
UBE2D3P4-201ENST00000441973 SOCS6O14544 535 aa4.09□□□□□ -1.75
UBE2D3P4-201ENST00000441973 MT-CYBP00156 380 aaPredicted RBP4.09□□□□□ -1.75
UBE2D3P4-201ENST00000441973 URODP06132 367 aa4.09□□□□□ -1.75
UBE2D3P4-201ENST00000441973 IRF1P10914 325 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms