RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 KIF9Q9HAQ2 790 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 SCPEP1Q9HB40 452 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 ASAH2Q9NR71 780 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 NFE2L3Q9Y4A8 694 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 KCNE2Q9Y6J6 123 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 PIAS3Q9Y6X2 628 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 USO1O60763 962 aaKnown RBP5.02□□□□□ -1.61
PFDN4-202ENST00000441080 PAGE4O60829 102 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 VNN2O95498 520 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 SCGB1D1O95968 90 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 HOXC6P09630 235 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 KRT10P13645 584 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 GPTP24298 496 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 C21orf33P30042 268 aaPredicted RBP5.02□□□□□ -1.61
PFDN4-202ENST00000441080 HOXA11P31270 313 aaPredicted RBP5.02□□□□□ -1.61
PFDN4-202ENST00000441080 MLH1P40692 756 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 PIP4K2AP48426 406 aaPredicted RBP5.02□□□□□ -1.61
PFDN4-202ENST00000441080 PCYT1AP49585 367 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 SETQ01105 290 aaPredicted RBP5.02□□□□□ -1.61
PFDN4-202ENST00000441080 DSC1Q08554 894 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 Q0VFX4 171 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 ERV3-1Q14264 604 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 NEDD9Q14511 834 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 MAPRE1Q15691 268 aaKnown RBP5.02□□□□□ -1.61
PFDN4-202ENST00000441080 KLHL24Q6TFL4 600 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 LINGO2Q7L985 606 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 SHFQ7M4L6 423 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 ADSSL1Q8N142 457 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 FBXL14Q8N1E6 418 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 AADATQ8N5Z0 425 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 Q8N9P0 234 aaPredicted RBP5.02□□□□□ -1.61
PFDN4-202ENST00000441080 ANKRD52Q8NB46 1076 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 TMEM116Q8NCL8 245 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 NEK9Q8TD19 979 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 ADAMTS14Q8WXS8 1223 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 SLITRK1Q96PX8 696 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 MAP7D2Q96T17 732 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 STRA6Q9BX79 667 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 FBRSL1Q9HCM7 1045 aaKnown RBP5.02□□□□□ -1.61
PFDN4-202ENST00000441080 PCDHA7Q9UN72 937 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 PSAT1Q9Y617 370 aa5.02□□□□□ -1.61
PFDN4-202ENST00000441080 TTC3P53804 2025 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 A0A1W2PRG0 241 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 DYTNA2CJ06 578 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 PI4KAP2A4QPH2 592 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 J3KR12 359 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 NTN1O95631 604 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 NFKBIAP25963 317 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 ARL3P36405 182 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 MXI1P50539 228 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 SORDQ00796 357 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 CRYZQ08257 329 aaKnown RBP5.01□□□□□ -1.61
PFDN4-202ENST00000441080 DRAP1Q14919 205 aaPredicted RBP5.01□□□□□ -1.61
PFDN4-202ENST00000441080 MMEL1Q495T6 779 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 TDRD12Q587J7 1177 aaKnown RBP5.01□□□□□ -1.61
PFDN4-202ENST00000441080 GPATCH4Q5T3I0 446 aaKnown RBP5.01□□□□□ -1.61
PFDN4-202ENST00000441080 SNX30Q5VWJ9 437 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 CYP20A1Q6UW02 462 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 C4orf50Q6ZRC1 276 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 QSOX2Q6ZRP7 698 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 CCDC129Q6ZRS4 1044 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 NGEFQ8N5V2 710 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 PDILTQ8N807 584 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 FRMD1Q8N878 549 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 MIB2Q96AX9 1013 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 FBXO9Q9UK97 447 aaPredicted RBP5.01□□□□□ -1.61
PFDN4-202ENST00000441080 SLC45A1Q9Y2W3 748 aa5.01□□□□□ -1.61
PFDN4-202ENST00000441080 CACNA1IQ9P0X4 2223 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 FAM237BA0A1B0GVD1 139 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 TMEM202A6NGA9 273 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 WNT9BO14905 357 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 RNASEH2AO75792 299 aaKnown RBP5□□□□□ -1.61
PFDN4-202ENST00000441080 SERPINI2O75830 405 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 DDX58O95786 925 aaKnown RBP5□□□□□ -1.61
PFDN4-202ENST00000441080 CH25HO95992 272 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 LAMP2P13473 410 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 HTR6P50406 440 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 CEBPZQ03701 1054 aaKnown RBP5□□□□□ -1.61
PFDN4-202ENST00000441080 LMOD3Q0VAK6 560 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 CSTF3Q12996 717 aaKnown RBP5□□□□□ -1.61
PFDN4-202ENST00000441080 OLIG2Q13516 323 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 NAE1Q13564 534 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 MED22Q15528 200 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 C8orf82Q6P1X6 216 aaPredicted RBP5□□□□□ -1.61
PFDN4-202ENST00000441080 MTSS1LQ765P7 747 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 FJX1Q86VR8 437 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 NEXN-AS1Q8NBZ9 246 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 AGBL3Q8NEM8 1001 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 B4GALNT2Q8NHY0 566 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 MMABQ96EY8 250 aaPredicted RBP5□□□□□ -1.61
PFDN4-202ENST00000441080 LRFN5Q96NI6 719 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 FAM110AQ9BQ89 295 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 NTPCRQ9BSD7 190 aaKnown RBP5□□□□□ -1.61
PFDN4-202ENST00000441080 MMTAG2Q9BU76 263 aaKnown RBP5□□□□□ -1.61
PFDN4-202ENST00000441080 MUC13Q9H3R2 512 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 EHD2Q9NZN4 543 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 DLGAP2Q9P1A6 1054 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 ABI3Q9P2A4 366 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 AGO1Q9UL18 857 aaKnown RBP5□□□□□ -1.61
PFDN4-202ENST00000441080 CDC14AQ9UNH5 594 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms