RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 PSME2Q9UL46 239 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 VANGL2Q9ULK5 521 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 SMCHD1A6NHR9 2005 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 NEMP2A6NFY4 417 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 AURKAO14965 403 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 SUPT7LO94864 414 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 ARSAP15289 507 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 NR4A2P43354 598 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 TUFMP49411 452 aaKnown RBP7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 SULT1E1P49888 294 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 ARPP19P56211 112 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 PIGFQ07326 219 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 CSHL1Q14406 222 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 DEPDC1Q5TB30 811 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 C15orf39Q6ZRI6 1047 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 RPS27LQ71UM5 84 aaKnown RBP7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 SLC22A16Q86VW1 577 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 SLC41A1Q8IVJ1 513 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 SCN4BQ8IWT1 228 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 C1orf127Q8N9H9 656 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 USP33Q8TEY7 942 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 ELMO1Q92556 727 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 ACDQ96AP0 544 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 MFSD3Q96ES6 412 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 RPL10LQ96L21 214 aaKnown RBP7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 SLC2A11Q9BYW1 496 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 FZD8Q9H461 694 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 EPS8L2Q9H6S3 715 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 TBC1D13Q9NVG8 400 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 SUCOQ9UBS9 1254 aaKnown RBP7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 CYTH4Q9UIA0 394 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 KCNH4Q9UQ05 1017 aa7.45□□□□□ -1.22
SYNPO2-203ENST00000434046 NRCAMQ92823 1304 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 A0A0A0MRY4 1105 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 LINC00854A0A1B0GVQ3 168 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 BCLAF3A2AJT9 711 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 TRIM64CA6NLI5 447 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 C9IYK1 514 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 IDH3BO43837 385 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 TBC1D4O60343 1298 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 SYNCRIPO60506 623 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 CAPN15O75808 1086 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 ALOX5P09917 674 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 NCK1P16333 377 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 TPSB2P20231 275 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 PSMB9P28065 219 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 ACADSBP45954 432 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 RPS9P46781 194 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 PSEN2P49810 448 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 TPSAB1Q15661 275 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 NDUFA5Q16718 116 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 NT5DC4Q86YG4 428 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 TICAM1Q8IUC6 712 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 RNF139Q8WU17 664 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 RAB2BQ8WUD1 216 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 TFAP2CQ92754 450 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 HDAC10Q969S8 669 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 SPATA13Q96N96 652 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 RNF38Q9H0F5 515 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 TRIM39Q9HCM9 518 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 PTBP2Q9UKA9 531 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 CNOT11Q9UKZ1 510 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 PNMA8BQ9ULN7 279 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 TCAF2A6NFQ2 919 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 ZNF195O14628 629 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 ACOT8O14734 319 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 RSL1D1O76021 490 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 SEC24AO95486 1093 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 SNAP29O95721 258 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 ENO2P09104 434 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 MTHFD1P11586 935 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 HPCAL1P37235 193 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 CAPGP40121 348 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 ATXN1P54253 815 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 BCAT1P54687 386 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 MBTD1Q05BQ5 628 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 TARBP2Q15633 366 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 PPP4R4Q6NUP7 873 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 TAF2Q6P1X5 1199 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 ERMP1Q7Z2K6 904 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 TMEM192Q8IY95 271 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 MICU2Q8IYU8 434 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 THEM5Q8N1Q8 247 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 ZNF555Q8NEP9 628 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 ABHD11Q8NFV4 315 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 RBBP8Q99708 897 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 MAGEB5Q9BZ81 275 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 WDR12Q9GZL7 423 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 MIR1-1HGQ9H1L0 117 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 MINDY3Q9H8M7 445 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 CACNA2D2Q9NY47 1150 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 MOCS1Q9NZB8 636 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 CPQQ9Y646 472 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 H0Y626 953 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 RAD51BO15315 384 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 XYLBO75191 536 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 CABYRO75952 493 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 TRIM16O95361 564 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 C22orf31O95567 290 aa7.44□□□□□ -1.22
SYNPO2-203ENST00000434046 SMIM10L2AP0DMW4 78 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms