RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 GPTP24298 496 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 TBX4P57082 545 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 ARHGEF6Q15052 776 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 MAP9Q49MG5 647 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 CCSAPQ6IQ19 270 aaPredicted RBP3.68□□□□□ -1.82
PTPN4-205ENST00000433888 CES5AQ6NT32 575 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 WDR73Q6P4I2 378 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 C17orf99Q6UX52 265 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 TMEM219Q86XT9 240 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 ODF3L1Q8IXM7 274 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 KCNH5Q8NCM2 988 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 THAP4Q8WY91 577 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 OTULINQ96BN8 352 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 F2RL3Q96RI0 385 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 LITAFQ99732 161 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 SAYSD1Q9NPB0 183 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 ABCF3Q9NUQ8 709 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 DERAQ9Y315 318 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 PCDHGB5Q9Y5G0 923 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 C17orf113A0A1B0GUU1 675 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 FAM90A7PA6NKC0 464 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 FAM90A22PA8MWA6 464 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 FAM90A12PA8MX19 464 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 FAM90A23PA8MXZ1 464 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 TK1P04183 234 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 PTPN2P17706 415 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 CHATP28329 748 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 ADD2P35612 726 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 AARSP49588 968 aaKnown RBP eCLIP3.67□□□□□ -1.82
PTPN4-205ENST00000433888 NR1H2P55055 460 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 GOLGA8FQ08AF8 430 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 BLMHQ13867 455 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 TIGD6Q17RP2 521 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 CCNI2Q6ZMN8 369 aaPredicted RBP3.67□□□□□ -1.82
PTPN4-205ENST00000433888 MOB3CQ70IA8 216 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 CPXM2Q8N436 756 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 GJC3Q8NFK1 279 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 DMBX1Q8NFW5 382 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 GRAPLQ8TC17 118 aaPredicted RBP3.67□□□□□ -1.82
PTPN4-205ENST00000433888 RAB40AQ8WXH6 277 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 RND1Q92730 232 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 CCDC136Q96JN2 1154 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 C17orf75Q9HAS0 396 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 PLEKHA5Q9HAU0 1116 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 TAAR2Q9P1P5 351 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 TINAGQ9UJW2 476 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 POU2F3Q9UKI9 436 aa3.67□□□□□ -1.82
PTPN4-205ENST00000433888 RALYQ9UKM9 306 aaKnown RBP3.67□□□□□ -1.82
PTPN4-205ENST00000433888 ARHGAP10A1A4S6 786 aa3.66□□□□□ -1.82
PTPN4-205ENST00000433888 CAPN9O14815 690 aa3.66□□□□□ -1.82
PTPN4-205ENST00000433888 IFIT2P09913 472 aaKnown RBP3.66□□□□□ -1.82
PTPN4-205ENST00000433888 RNF224P0DH78 156 aa3.66□□□□□ -1.82
PTPN4-205ENST00000433888 BLKP51451 505 aa3.66□□□□□ -1.82
PTPN4-205ENST00000433888 CLDN2P57739 230 aa3.66□□□□□ -1.82
PTPN4-205ENST00000433888 PITX1P78337 314 aaPredicted RBP3.66□□□□□ -1.82
PTPN4-205ENST00000433888 EDRF1Q3B7T1 1238 aa3.66□□□□□ -1.82
PTPN4-205ENST00000433888 CTXN3Q4LDR2 81 aa3.66□□□□□ -1.82
PTPN4-205ENST00000433888 CCDC38Q502W7 563 aa3.66□□□□□ -1.82
PTPN4-205ENST00000433888 ANKRD54Q6NXT1 300 aa3.66□□□□□ -1.82
PTPN4-205ENST00000433888 WDR63Q8IWG1 891 aa3.66□□□□□ -1.82
PTPN4-205ENST00000433888 SLC24A4Q8NFF2 622 aa3.66□□□□□ -1.82
PTPN4-205ENST00000433888 SLC20A1Q8WUM9 679 aa3.66□□□□□ -1.82
PTPN4-205ENST00000433888 ABTB1Q969K4 478 aaPredicted RBP3.66□□□□□ -1.82
PTPN4-205ENST00000433888 SH3KBP1Q96B97 665 aa3.66□□□□□ -1.82
PTPN4-205ENST00000433888 HAUS8Q9BT25 410 aa3.66□□□□□ -1.82
PTPN4-205ENST00000433888 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.66□□□□□ -1.82
PTPN4-205ENST00000433888 ZNF700Q9H0M5 742 aa3.66□□□□□ -1.82
PTPN4-205ENST00000433888 MCM9Q9NXL9 1143 aa3.66□□□□□ -1.82
PTPN4-205ENST00000433888 CISD1Q9NZ45 108 aaKnown RBP3.66□□□□□ -1.82
PTPN4-205ENST00000433888 PABPN1LA6NDY0 278 aaKnown RBP3.65□□□□□ -1.83
PTPN4-205ENST00000433888 ZNF500O60304 480 aaPredicted RBP3.65□□□□□ -1.83
PTPN4-205ENST00000433888 KRT5P13647 590 aa3.65□□□□□ -1.83
PTPN4-205ENST00000433888 HSP90AB2PQ58FF8 381 aa3.65□□□□□ -1.83
PTPN4-205ENST00000433888 KCNT1Q5JUK3 1230 aa3.65□□□□□ -1.83
PTPN4-205ENST00000433888 MTSS1LQ765P7 747 aa3.65□□□□□ -1.83
PTPN4-205ENST00000433888 TBC1D26Q86UD7 250 aa3.65□□□□□ -1.83
PTPN4-205ENST00000433888 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.65□□□□□ -1.83
PTPN4-205ENST00000433888 METTL27Q8N6F8 245 aaPredicted RBP3.65□□□□□ -1.83
PTPN4-205ENST00000433888 BBS10Q8TAM1 723 aa3.65□□□□□ -1.83
PTPN4-205ENST00000433888 BARHL1Q9BZE3 327 aa3.65□□□□□ -1.83
PTPN4-205ENST00000433888 KCNN2Q9H2S1 579 aa3.65□□□□□ -1.83
PTPN4-205ENST00000433888 ESRP2Q9H6T0 727 aaKnown RBP3.65□□□□□ -1.83
PTPN4-205ENST00000433888 DDX4Q9NQI0 724 aaKnown RBP3.65□□□□□ -1.83
PTPN4-205ENST00000433888 SMYD2Q9NRG4 433 aa3.65□□□□□ -1.83
PTPN4-205ENST00000433888 DNAJC16Q9Y2G8 782 aa3.65□□□□□ -1.83
PTPN4-205ENST00000433888 IGKV3D-15A0A087WSY6 115 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 B9A039 149 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 PER2O15055 1255 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 CEP104O60308 925 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 S1PR1P21453 382 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 ALDH4A1P30038 563 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 KRT2P35908 639 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 IL15P40933 162 aaPredicted RBP3.64□□□□□ -1.83
PTPN4-205ENST00000433888 FMO5P49326 533 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 SEC61BP60468 96 aaKnown RBP3.64□□□□□ -1.83
PTPN4-205ENST00000433888 PMP22Q01453 160 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 SREBF2Q12772 1141 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 PPIGQ13427 754 aaKnown RBP eCLIP3.64□□□□□ -1.831e-6■■■■□ 24.6
PTPN4-205ENST00000433888 NEDD9Q14511 834 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 ARHGAP11AQ6P4F7 1023 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms