RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 CST8O60676 142 aa11□□□□□ -0.65
USP49-204ENST00000423567 TRIM16O95361 564 aa11□□□□□ -0.65
USP49-204ENST00000423567 JCHAINP01591 159 aa11□□□□□ -0.65
USP49-204ENST00000423567 PRKCGP05129 697 aa11□□□□□ -0.65
USP49-204ENST00000423567 TGM2P21980 687 aa11□□□□□ -0.65
USP49-204ENST00000423567 CDKN2BP42772 138 aa11□□□□□ -0.65
USP49-204ENST00000423567 EPHB1P54762 984 aa11□□□□□ -0.65
USP49-204ENST00000423567 SLC10A2Q12908 348 aaPredicted RBP11□□□□□ -0.65
USP49-204ENST00000423567 TRAF2Q12933 501 aa11□□□□□ -0.65
USP49-204ENST00000423567 PDE1CQ14123 709 aaPredicted RBP11□□□□□ -0.65
USP49-204ENST00000423567 LRRC14Q15048 493 aa11□□□□□ -0.65
USP49-204ENST00000423567 TFDP3Q5H9I0 405 aa11□□□□□ -0.65
USP49-204ENST00000423567 CCDC181Q5TID7 509 aa11□□□□□ -0.65
USP49-204ENST00000423567 KAZNQ674X7 775 aa11□□□□□ -0.65
USP49-204ENST00000423567 USP45Q70EL2 814 aa11□□□□□ -0.65
USP49-204ENST00000423567 PARGQ86W56 976 aa11□□□□□ -0.65
USP49-204ENST00000423567 ZSWIM9Q86XI8 627 aa11□□□□□ -0.65
USP49-204ENST00000423567 GATAD2AQ86YP4 633 aa11□□□□□ -0.65
USP49-204ENST00000423567 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11□□□□□ -0.65
USP49-204ENST00000423567 EXD1Q8NHP7 514 aa11□□□□□ -0.65
USP49-204ENST00000423567 SAP25Q8TEE9 199 aa11□□□□□ -0.65
USP49-204ENST00000423567 P3H4Q92791 437 aa11□□□□□ -0.65
USP49-204ENST00000423567 CENPTQ96BT3 561 aa11□□□□□ -0.65
USP49-204ENST00000423567 KCTD12Q96CX2 325 aaKnown RBP11□□□□□ -0.65
USP49-204ENST00000423567 IFT43Q96FT9 208 aa11□□□□□ -0.65
USP49-204ENST00000423567 BMFQ96LC9 184 aa11□□□□□ -0.65
USP49-204ENST00000423567 LGMNQ99538 433 aa11□□□□□ -0.65
USP49-204ENST00000423567 KLF6Q99612 283 aaPredicted RBP11□□□□□ -0.65
USP49-204ENST00000423567 DNAJC28Q9NX36 388 aa11□□□□□ -0.65
USP49-204ENST00000423567 SEPT10Q9P0V9 454 aa11□□□□□ -0.65
USP49-204ENST00000423567 FTSJ1Q9UET6 329 aa11□□□□□ -0.65
USP49-204ENST00000423567 APOBEC2Q9Y235 224 aaKnown RBP11□□□□□ -0.65
USP49-204ENST00000423567 REXO2Q9Y3B8 237 aaKnown RBP11□□□□□ -0.65
USP49-204ENST00000423567 RAI2Q9Y5P3 530 aa11□□□□□ -0.65
USP49-204ENST00000423567 PLXNA2O75051 1894 aa11□□□□□ -0.65
USP49-204ENST00000423567 CACNA1AO00555 2505 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 SPTY2D1-AS1A0A0U1RR47 76 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 MACROD2A1Z1Q3 448 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 CCDC66A2RUB6 948 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 KCNK1O00180 336 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 SDC3O75056 442 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 CBFA2T3O75081 653 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 PGLSO95336 258 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 HLA-DQB2P05538 268 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 PTMAP06454 111 aaKnown RBP10.99□□□□□ -0.65
USP49-204ENST00000423567 HTR1BP28222 390 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 VIPR1P32241 457 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 CTNNA1P35221 906 aaKnown RBP10.99□□□□□ -0.65
USP49-204ENST00000423567 COPS2P61201 443 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 HNRNPKP61978 463 aaKnown RBP eCLIP10.99□□□□□ -0.65
USP49-204ENST00000423567 YPEL5P62699 121 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 IFI35P80217 286 aaPredicted RBP10.99□□□□□ -0.65
USP49-204ENST00000423567 SEMG2Q02383 582 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 DSC2Q02487 901 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 FOXC1Q12948 553 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 ARHGEF7Q14155 803 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 ACOX1Q15067 660 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 IRF4Q15306 451 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 PPP2R5EQ16537 467 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 ALG1LQ6GMV1 187 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 NPNTQ6UXI9 565 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 GLRX5Q86SX6 157 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 TMEM139Q8IV31 216 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 UBL4BQ8N7F7 174 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 CCDC112Q8NEF3 446 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 ATL2Q8NHH9 583 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 LRRN4Q8WUT4 740 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 TFB1MQ8WVM0 346 aaKnown RBP10.99□□□□□ -0.65
USP49-204ENST00000423567 OLFM3Q96PB7 478 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 FERMT1Q9BQL6 677 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 DESI2Q9BSY9 194 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 TSGA10Q9BZW7 698 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 LACRTQ9GZZ8 138 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 KCTD5Q9NXV2 234 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 B4GALT6Q9UBX8 382 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 RABGEF1Q9UJ41 708 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 SALL4Q9UJQ4 1053 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 ANGPTL2Q9UKU9 493 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 AMFRQ9UKV5 643 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 BTBD3Q9Y2F9 522 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 COQ6Q9Y2Z9 468 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 DUSP10Q9Y6W6 482 aa10.99□□□□□ -0.65
USP49-204ENST00000423567 ASCC3Q8N3C0 2202 aaKnown RBP10.99□□□□□ -0.65
USP49-204ENST00000423567 hCG_1818297A0A087WSY0 165 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 NEMP2A6NFY4 417 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 A8MX80 341 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 ARHGAP6O43182 974 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 MTSS1O43312 755 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 MAP3K7O43318 606 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 TNFSF14O43557 240 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 RECQL5O94762 991 aaPredicted RBP10.98□□□□□ -0.65
USP49-204ENST00000423567 PCCBP05166 539 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 FTH1P19P0C7X4 201 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 ALPPL2P10696 532 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 CTNNA2P26232 953 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 PMLP29590 882 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 IGFALSP35858 605 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 MARCKSL1P49006 195 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 PEX5P50542 639 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 RWDD2BP57060 319 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms