RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 RTP4Q96DX8 246 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 FEM1CQ96JP0 617 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 HSPA12BQ96MM6 686 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 GORASP1Q9BQQ3 440 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 WRAP53Q9BUR4 548 aaKnown RBP9.33□□□□□ -0.92
PDGFC-202ENST00000422544 TDRD1Q9BXT4 1180 aaKnown RBP9.33□□□□□ -0.92
PDGFC-202ENST00000422544 GBA3Q9H227 469 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 KDM4CQ9H3R0 1056 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 PCDH9Q9HC56 1237 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 PREBQ9HCU5 417 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 FAM153AQ9UHL3 310 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 RAB23Q9ULC3 237 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 PHTF1Q9UMS5 762 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 SMG5Q9UPR3 1016 aaKnown RBP9.33□□□□□ -0.92
PDGFC-202ENST00000422544 SHROOM3Q8TF72 1996 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 FREM2Q5SZK8 3169 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 GOLGA6L10A0A0M3HER8 536 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 A0A0U1RQS6 177 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 IGLON5A6NGN9 336 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 MEI4A8MW99 385 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 C10orf142B7Z368 130 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 TSPAN6O43657 245 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 MMP20O60882 483 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 ALPIP09923 528 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 TGM1P22735 817 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 CA4P22748 312 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 ITPKAP23677 461 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 PAFAH1B1P43034 410 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 SUOXP51687 545 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 EPHB1P54762 984 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 CDK18Q07002 472 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 GALNT3Q14435 633 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 PRPSAP1Q14558 356 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 CYP1B1Q16678 543 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 QPCTQ16769 361 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 P3H1Q32P28 736 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 TMEM52BQ4KMG9 183 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 SPDYCQ5MJ68 293 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 SYCP2LQ5T4T6 812 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 FAXCQ5TGI0 409 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 LYSMD4Q5XG99 296 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 SEL1L3Q68CR1 1132 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 ERAP2Q6P179 960 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 NEK5Q6P3R8 708 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 DGLUCYQ7Z3D6 616 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 HORMAD1Q86X24 394 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 RGL4Q8IZJ4 473 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 SLC25A41Q8N5S1 370 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 IPMKQ8NFU5 416 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 CXorf40AQ8TE69 158 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 SNX19Q92543 992 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 FOXJ1Q92949 421 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 IFT43Q96FT9 208 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 MRGPRX2Q96LB1 330 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 TRIB3Q96RU7 358 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 MLPHQ9BV36 600 aaPredicted RBP9.32□□□□□ -0.92
PDGFC-202ENST00000422544 PCED1AQ9H1Q7 454 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 SEMA4AQ9H3S1 761 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 EBF2Q9HAK2 575 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 VPS45Q9NRW7 570 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 RNF14Q9UBS8 474 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 B4GALT6Q9UBX8 382 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 EIF2B4Q9UI10 523 aaKnown RBP9.32□□□□□ -0.92
PDGFC-202ENST00000422544 ZFR2Q9UPR6 939 aaKnown RBP9.32□□□□□ -0.92
PDGFC-202ENST00000422544 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.32□□□□□ -0.92
PDGFC-202ENST00000422544 AAR2Q9Y312 384 aaKnown RBP9.32□□□□□ -0.92
PDGFC-202ENST00000422544 PKD1L2Q7Z442 2459 aa9.32□□□□□ -0.92
PDGFC-202ENST00000422544 A0A0J9YYE9 177 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 LOC285095A0A1B0GVY8 99 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 GOLGA8CPA6NN73 597 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 ANKRD66B4E2M5 251 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 SLC31A1O15431 190 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 PHF2O75151 1096 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 ANXA9O76027 345 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 URI1O94763 535 aaPredicted RBP9.31□□□□□ -0.92
PDGFC-202ENST00000422544 NDST3O95803 873 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 PAK4O96013 591 aaPredicted RBP9.31□□□□□ -0.92
PDGFC-202ENST00000422544 AGTP01019 485 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 TRBC1P01850 177 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 LMNAP02545 664 aaKnown RBP9.31□□□□□ -0.92
PDGFC-202ENST00000422544 RPL22P35268 128 aaKnown RBP9.31□□□□□ -0.92
PDGFC-202ENST00000422544 ACTN2P35609 894 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 HNF1BP35680 557 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 MMP12P39900 470 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 CHRNA4P43681 627 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 LIG3P49916 1009 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 CCR5P51681 352 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 GEMP55040 296 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 RPL26P61254 145 aaKnown RBP9.31□□□□□ -0.92
PDGFC-202ENST00000422544 RPS21P63220 83 aaKnown RBP9.31□□□□□ -0.92
PDGFC-202ENST00000422544 CREB5Q02930 508 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 ELP6Q0PNE2 266 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 RALGDSQ12967 914 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 MPP3Q13368 585 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 OLIG2Q13516 323 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 FGL2Q14314 439 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 SPARCL1Q14515 664 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 TRIP13Q15645 432 aaPredicted RBP9.31□□□□□ -0.92
PDGFC-202ENST00000422544 SLC14A2Q15849 920 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 ZNF284Q2VY69 593 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms