RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 B4GALT6Q9UBX8 382 aa17.62■□□□□ 0.41
LINC00271-201ENST00000421378 GGT7Q9UJ14 662 aa17.62■□□□□ 0.41
LINC00271-201ENST00000421378 UTP11Q9Y3A2 253 aaKnown RBP17.62■□□□□ 0.41
LINC00271-201ENST00000421378 PCDHGA2Q9Y5H1 932 aa17.62■□□□□ 0.41
LINC00271-201ENST00000421378 NUMA1Q14980 2115 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 TBC1D3DA0A087WVF3 549 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 TBC1D3IA0A087WXS9 549 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 TBC1D3EA0A087X179 549 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 TBC1D3KA0A087X1G2 549 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 TBC1D3FA6NER0 549 aaPredicted RBP17.61■□□□□ 0.41
LINC00271-201ENST00000421378 PRR23AA6NEV1 266 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 NPIPB15A6NHN6 443 aaPredicted RBP17.61■□□□□ 0.41
LINC00271-201ENST00000421378 TBC1D3LB9A6J9 549 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 TSPAN6O43657 245 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 NDUFS2O75306 463 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 PCDH8O95206 1070 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 TBC1D3HP0C7X1 549 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 CYP2A6P11509 494 aaPredicted RBP17.61■□□□□ 0.41
LINC00271-201ENST00000421378 HNF1BP35680 557 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 MAGEA6P43360 314 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 SEMG2Q02383 582 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 TBC1D3GQ6DHY5 549 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 TBC1D3CQ6IPX1 549 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 SLC36A4Q6YBV0 504 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 PPP1R21Q6ZMI0 780 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 DPPA4Q7L190 304 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 PCGF5Q86SE9 256 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 TBC1D3Q8IZP1 549 aaPredicted RBP17.61■□□□□ 0.41
LINC00271-201ENST00000421378 ZBTB44Q8NCP5 570 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 OR2T34Q8NGX1 318 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 GAB3Q8WWW8 586 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 SNF8Q96H20 258 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 SMIM14Q96QK8 99 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 LYSMD1Q96S90 227 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 ERP44Q9BS26 406 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 LRRC1Q9BTT6 524 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 GPR174Q9BXC1 333 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 ARNT2Q9HBZ2 717 aa17.61■□□□□ 0.41
LINC00271-201ENST00000421378 MBD1Q9UIS9 605 aaPredicted RBP17.61■□□□□ 0.41
LINC00271-201ENST00000421378 TPX2Q9ULW0 747 aaKnown RBP17.61■□□□□ 0.41
LINC00271-201ENST00000421378 A8MX80 341 aa17.6■□□□□ 0.41
LINC00271-201ENST00000421378 DNALI1O14645 258 aaPredicted RBP17.6■□□□□ 0.41
LINC00271-201ENST00000421378 MAP3K13O43283 966 aa17.6■□□□□ 0.41
LINC00271-201ENST00000421378 PIRTP0C851 137 aa17.6■□□□□ 0.41
LINC00271-201ENST00000421378 IVDP26440 423 aa17.6■□□□□ 0.41
LINC00271-201ENST00000421378 CNR2P34972 360 aa17.6■□□□□ 0.41
LINC00271-201ENST00000421378 RPL6Q02878 288 aaKnown RBP17.6■□□□□ 0.41
LINC00271-201ENST00000421378 CDH17Q12864 832 aa17.6■□□□□ 0.41
LINC00271-201ENST00000421378 PTPRRQ15256 657 aa17.6■□□□□ 0.41
LINC00271-201ENST00000421378 RNASEH2BQ5TBB1 312 aaKnown RBP17.6■□□□□ 0.41
LINC00271-201ENST00000421378 IZUMO3Q5VZ72 239 aa17.6■□□□□ 0.41
LINC00271-201ENST00000421378 C11orf74Q86VG3 221 aa17.6■□□□□ 0.41
LINC00271-201ENST00000421378 PPIL6Q8IXY8 311 aa17.6■□□□□ 0.41
LINC00271-201ENST00000421378 DNAAF3Q8N9W5 541 aa17.6■□□□□ 0.41
LINC00271-201ENST00000421378 WRAP53Q9BUR4 548 aaKnown RBP17.6■□□□□ 0.41
LINC00271-201ENST00000421378 VPS13AQ96RL7 3174 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 C1orf232A0A0U1RR37 186 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 TCRBV7S3A2A0A539 114 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 H0Y858 1186 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 TMEM63AO94886 807 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 SEC31AO94979 1220 aaKnown RBP17.59■□□□□ 0.41
LINC00271-201ENST00000421378 ELFN1P0C7U0 828 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 BCKDHBP21953 392 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 LHCGRP22888 699 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 VIPR1P32241 457 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 GRIA1P42261 906 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 SARNPP82979 210 aaKnown RBP17.59■□□□□ 0.41
LINC00271-201ENST00000421378 RALGDSQ12967 914 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 SRSF5Q13243 272 aaKnown RBP17.59■□□□□ 0.41
LINC00271-201ENST00000421378 ARHGEF7Q14155 803 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 GLE1Q53GS7 698 aaKnown RBP17.59■□□□□ 0.41
LINC00271-201ENST00000421378 ANKRD22Q5VYY1 191 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 LRRC66Q68CR7 880 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 DENND5AQ6IQ26 1287 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 KIAA1161Q6NSJ0 714 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 NEK5Q6P3R8 708 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 NAT8LQ8N9F0 302 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 OR52K1Q8NGK4 314 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 CXorf40AQ8TE69 158 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 SRPK1Q96SB4 655 aaKnown RBP17.59■□□□□ 0.41
LINC00271-201ENST00000421378 MAGEE1Q9HCI5 957 aa17.59■□□□□ 0.41
LINC00271-201ENST00000421378 PIH1D1Q9NWS0 290 aaKnown RBP17.59■□□□□ 0.41
LINC00271-201ENST00000421378 ZNF30P17039 623 aa17.58■□□□□ 0.41
LINC00271-201ENST00000421378 RPL21P46778 160 aaKnown RBP17.58■□□□□ 0.41
LINC00271-201ENST00000421378 PPP2CBP62714 309 aa17.58■□□□□ 0.41
LINC00271-201ENST00000421378 RPS21P63220 83 aaKnown RBP17.58■□□□□ 0.41
LINC00271-201ENST00000421378 PPP2CAP67775 309 aa17.58■□□□□ 0.41
LINC00271-201ENST00000421378 SLC7A5Q01650 507 aa17.58■□□□□ 0.41
LINC00271-201ENST00000421378 TMEM52BQ4KMG9 183 aa17.58■□□□□ 0.41
LINC00271-201ENST00000421378 TSPAN33Q86UF1 283 aa17.58■□□□□ 0.41
LINC00271-201ENST00000421378 HOOK3Q86VS8 718 aa17.58■□□□□ 0.41
LINC00271-201ENST00000421378 LRRN4CLQ8ND94 238 aa17.58■□□□□ 0.41
LINC00271-201ENST00000421378 BLOC1S5Q8TDH9 187 aa17.58■□□□□ 0.41
LINC00271-201ENST00000421378 PCED1AQ9H1Q7 454 aa17.58■□□□□ 0.41
LINC00271-201ENST00000421378 DPH5Q9H2P9 285 aa17.58■□□□□ 0.41
LINC00271-201ENST00000421378 C6orf106Q9H6K1 298 aaPredicted RBP17.58■□□□□ 0.41
LINC00271-201ENST00000421378 HACD3Q9P035 362 aa17.58■□□□□ 0.41
LINC00271-201ENST00000421378 SNX24Q9Y343 169 aa17.58■□□□□ 0.41
LINC00271-201ENST00000421378 A0A1W2PQU0 124 aa17.57■□□□□ 0.4
LINC00271-201ENST00000421378 AP3B1O00203 1094 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms