RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 MDM4O15151 490 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 FIBPO43427 364 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 CREB3O43889 395 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 HBP1O60381 514 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 EPN2O95208 641 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 CHRNB1P11230 501 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 DESP17661 470 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 KLRC2P26717 231 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 TNFRSF8P28908 595 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 CCT5P48643 541 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 PSMD7P51665 324 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 PPFIA1Q13136 1202 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 CUL3Q13618 768 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 CUL4BQ13620 913 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 NFATC4Q14934 902 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 ANKRD1Q15327 319 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 CCDC40Q4G0X9 1142 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 PLEKHO1Q53GL0 409 aaPredicted RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 BEND6Q5SZJ8 279 aaPredicted RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 GFI1BQ5VTD9 330 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 TMEM268Q5VZI3 342 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 ZNF324BQ6AW86 544 aaPredicted RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 KIAA1324Q6UXG2 1013 aaKnown RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 RBM43Q6ZSC3 357 aaKnown RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 C2CD5Q86YS7 1000 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 CEP57L1Q8IYX8 460 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 NKAPQ8N5F7 415 aaKnown RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 ANKRD42Q8N9B4 389 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 MSANTD4Q8NCY6 345 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 LSM14AQ8ND56 463 aaKnown RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 CSGALNACT1Q8TDX6 532 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 KAT2AQ92830 837 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 JAKMIP2Q96AA8 810 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 SH3KBP1Q96B97 665 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 ZBTB10Q96DT7 871 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 BICD1Q96G01 975 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 ZNF333Q96JL9 665 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 FAM84BQ96KN1 310 aaPredicted RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 ZSCAN31Q96LW9 406 aaPredicted RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 CCDC114Q96M63 670 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 JAKMIP1Q96N16 626 aaKnown RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 FRG2BQ96QU4 278 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 MOV10L1Q9BXT6 1211 aaKnown RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 HDHD5Q9BXW7 423 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 PARD6BQ9BYG5 372 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 ARHGAP39Q9C0H5 1083 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 CLSTN2Q9H4D0 955 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 PLEKHA2Q9HB19 425 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 PNRC2Q9NPJ4 139 aaKnown RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 SLC22A11Q9NSA0 550 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 CWC25Q9NXE8 425 aaPredicted RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 TRMT1Q9NXH9 659 aaKnown RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 TBC1D14Q9P2M4 693 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 SUN2Q9UH99 717 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 NRBP1Q9UHY1 535 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 HOOK1Q9UJC3 728 aaKnown RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 KIAA0586Q9BVV6 1533 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 FANCAO15360 1455 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 ADGRL2O95490 1459 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 C9orf84Q5VXU9 1444 aa3.53□□□□□ -1.85
SDCBPP3-201ENST00000419629 PPIP5K1Q6PFW1 1433 aa3.53□□□□□ -1.85
SDCBPP3-201ENST00000419629 YTHDC2Q9H6S0 1430 aaKnown RBP3.53□□□□□ -1.85
SDCBPP3-201ENST00000419629 MSH6P52701 1360 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 DISP3Q9P2K9 1392 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 TRPM1Q7Z4N2 1603 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 EVC2Q86UK5 1308 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 GOLGA6L10A0A0M3HER8 536 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 TCRBV7S3A2A0A539 114 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 C17orf102A2RUQ5 167 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 A6NNC1 897 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 GOLGA8KD6RF30 607 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 EIF3HO15372 352 aaKnown RBP eCLIP3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 TPD52L2O43399 206 aaKnown RBP3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 STX6O43752 255 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 ATG13O75143 517 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 E2F6O75461 281 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 TMCC1O94876 653 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 IGKV3-20P01619 116 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 FGF3P11487 239 aaPredicted RBP3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 ACP5P13686 325 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 SYT1P21579 422 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 PRKCHP24723 683 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 ALDH1B1P30837 517 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 HSPA4P34932 840 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 RANBP1P43487 201 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 POLD2P49005 469 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 FNTAP49354 379 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 AMPHP49418 695 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 CLCNKBP51801 687 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 P2RX3P56373 397 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 ACTN3Q08043 901 aaPredicted RBP3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 PRPF4BQ13523 1007 aaKnown RBP3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 EFR3AQ14156 821 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 CASP8Q14790 479 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 SLC4A8Q2Y0W8 1093 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 ALDH1L2Q3SY69 923 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 CCDC92Q53HC0 331 aaPredicted RBP3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 ENTPD8Q5MY95 495 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 C9orf50Q5SZB4 431 aa3.52□□□□□ -1.85
SDCBPP3-201ENST00000419629 NCAPH2Q6IBW4 605 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms