RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 EPHA7Q15375 998 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 AGAP9Q5VTM2 703 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 FRMD7Q6ZUT3 714 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 SRGAP1Q7Z6B7 1085 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 C11orf96Q7Z7L8 435 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 CLEC14AQ86T13 490 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 ZNF554Q86TJ5 538 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 ITPRIPQ8IWB1 547 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 SFTPA1Q8IWL2 248 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 BRSK2Q8IWQ3 736 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 SIRT2Q8IXJ6 389 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 SLC7A5P1Q8MH63 180 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 ARL10Q8N8L6 244 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 SCAIQ8N9R8 606 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 C9orf43Q8TAL5 461 aaPredicted RBP5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 DEPTORQ8TB45 409 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 SUN5Q8TC36 379 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 PDCD6IPQ8WUM4 868 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 SNX19Q92543 992 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 ESR2Q92731 530 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 CDKL2Q92772 493 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 PMM1Q92871 262 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 PSMG2Q969U7 264 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 SDCCAG3Q96C92 435 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 PPP1R13BQ96KQ4 1090 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 SEC62Q99442 399 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 SH3GL2Q99962 352 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 GPR174Q9BXC1 333 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 SLC46A2Q9BY10 475 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 YIPF3Q9GZM5 350 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 TNMDQ9H2S6 317 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 PARVGQ9HBI0 331 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 PDE11AQ9HCR9 933 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 ZDHHC4Q9NPG8 344 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 CD93Q9NPY3 652 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 RIC8BQ9NVN3 520 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 FKBP14Q9NWM8 211 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 DCAF16Q9NXF7 216 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 CTNND2Q9UQB3 1225 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 ENTPD4Q9Y227 616 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 ANKHD1Q8IWZ3 2542 aaKnown RBP5.65□□□□□ -1.51
ECHDC1-206ENST00000417628 SVILO95425 2214 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 HIVEP3Q5T1R4 2406 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 IGKV6-21A0A0C4DH24 114 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 ZC3H12DA2A288 527 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 HTR3EA5X5Y0 456 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 TMEM247A6NEH6 219 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 H0YC42 278 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 I3L4J1 428 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 MYO1FO00160 1098 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 YKT6O15498 198 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 SMIM24O75264 130 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 SEC31AO94979 1220 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 KAT7O95251 611 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 NFATC1O95644 943 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 LDLRP01130 860 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 APODP05090 189 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 THP07101 528 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 EPB41P11171 864 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 CCND1P24385 295 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 ACP1P24666 158 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 PSMA3P25788 255 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 CD40P25942 277 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 GNALP38405 381 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 ALDH1A3P47895 512 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 MLLT10P55197 1068 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 TPD52P55327 224 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 GEMIN4P57678 1058 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 LRMPQ12912 555 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 SRSF6Q13247 344 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 BIRC3Q13489 604 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 MLC1Q15049 377 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 PLCL1Q15111 1095 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 RASA2Q15283 850 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 NDUFA5Q16718 116 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 SLC35G1Q2M3R5 365 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 CTXN3Q4LDR2 81 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 CEP55Q53EZ4 464 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 NDUFAF5Q5TEU4 345 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 TMEM53Q6P2H8 277 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 BORAQ6PGQ7 559 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 C6orf89Q6UWU4 347 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 KIAA1324Q6UXG2 1013 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 ITIH5Q86UX2 942 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 RAB11FIP4Q86YS3 637 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 TPH2Q8IWU9 490 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 ZZZ3Q8IYH5 903 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 FAM186BQ8IYM0 893 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 LILRA2Q8N149 483 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 NSMCE1Q8WV22 266 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 TOE1Q96GM8 510 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 SLC7A5P2Q9GIP4 190 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 MIS12Q9H081 205 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 CENPHQ9H3R5 247 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 RIOX1Q9H6W3 641 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 MINDY3Q9H8M7 445 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 ANO10Q9NW15 660 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 MKS1Q9NXB0 559 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 WSB2Q9NYS7 404 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 MAD2L2Q9UI95 211 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms