RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 FIS1Q9Y3D6 152 aa16.33■□□□□ 0.2
LSP1-204ENST00000406638 ARL5CA6NH57 179 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 PAPSS1O43252 624 aaPredicted RBP16.32■□□□□ 0.2
LSP1-204ENST00000406638 SNAP91O60641 907 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 CCNA2P20248 432 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 MYF6P23409 242 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 CST5P28325 142 aaPredicted RBP16.32■□□□□ 0.2
LSP1-204ENST00000406638 NME5P56597 212 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 HERC3Q15034 1050 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 KCNJ8Q15842 424 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 OR6B2Q6IFH4 312 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 RNF180Q86T96 592 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 NT5DC4Q86YG4 428 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 SNX29P2Q8IUI4 249 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 PCYOX1LQ8NBM8 494 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 CLEC4CQ8WTT0 213 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 MCRS1Q96EZ8 462 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 ADAM2Q99965 735 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 SLC39A3Q9BRY0 314 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 TPK1Q9H3S4 243 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 SOX17Q9H6I2 414 aaPredicted RBP16.32■□□□□ 0.2
LSP1-204ENST00000406638 DERAQ9Y315 318 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 TCRBV3S1A0A5B6 114 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 A8MU76 341 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 CLDN5O00501 218 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 C2P06681 752 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 VDRP11473 427 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 TKTP29401 623 aaKnown RBP16.32■□□□□ 0.2
LSP1-204ENST00000406638 SEMA5AQ13591 1074 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 KIAA0319Q5VV43 1072 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 WSCD1Q658N2 575 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 CDKL3Q8IVW4 592 aaPredicted RBP16.32■□□□□ 0.2
LSP1-204ENST00000406638 CADM3Q8N126 398 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 TMCO5AQ8N6Q1 288 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 NDRG1Q92597 394 aaKnown RBP16.32■□□□□ 0.2
LSP1-204ENST00000406638 PBXIP1Q96AQ6 731 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 TCF12Q99081 682 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 HERC2P3Q9BVR0 1158 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 DRC3Q9H069 523 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 A0A1W2PQ45 241 aaPredicted RBP16.32■□□□□ 0.2
LSP1-204ENST00000406638 A0A1W2PQY0 241 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 C2CD4BA6NLJ0 364 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 MED7O43513 233 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 NOL3O60936 208 aaKnown RBP16.32■□□□□ 0.2
LSP1-204ENST00000406638 BCL10O95999 233 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 PGAM1P18669 254 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 PCBP1Q15365 356 aaKnown RBP eCLIP16.32■□□□□ 0.2
LSP1-204ENST00000406638 FAM117BQ6P1L5 589 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 ANKFN1Q8N957 763 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 CERS2Q96G23 380 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 FCRL3Q96P31 734 aaPredicted RBP16.32■□□□□ 0.2
LSP1-204ENST00000406638 SNRNP25Q9BV90 132 aaKnown RBP16.32■□□□□ 0.2
LSP1-204ENST00000406638 ACE2Q9BYF1 805 aaPredicted RBP16.32■□□□□ 0.2
LSP1-204ENST00000406638 UNC93B1Q9H1C4 597 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 TASP1Q9H6P5 420 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 PALMDQ9NP74 551 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 CCDC167Q9P0B6 97 aa16.32■□□□□ 0.2
LSP1-204ENST00000406638 SLC22A2O15244 555 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 CLOCKO15516 846 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 STAU1O95793 577 aaKnown RBP16.31■□□□□ 0.2
LSP1-204ENST00000406638 PAX3P23760 479 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 CYP2F1P24903 491 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 HOXD10P28358 340 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 GRK4P32298 578 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 POLR2IP36954 125 aaKnown RBP16.31■□□□□ 0.2
LSP1-204ENST00000406638 NSUN2Q08J23 767 aaKnown RBP eCLIP16.31■□□□□ 0.2
LSP1-204ENST00000406638 PLCL1Q15111 1095 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 C6orf10Q5SRN2 563 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 HEATR6Q6AI08 1181 aaKnown RBP16.31■□□□□ 0.2
LSP1-204ENST00000406638 EPHX4Q8IUS5 362 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 LRRC52Q8N7C0 313 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 PCSK9Q8NBP7 692 aaKnown RBP16.31■□□□□ 0.2
LSP1-204ENST00000406638 UHRF1Q96T88 793 aaPredicted RBP16.31■□□□□ 0.2
LSP1-204ENST00000406638 KLHL25Q9H0H3 589 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 GBA3Q9H227 469 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 SIAEQ9HAT2 523 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 CROTQ9UKG9 612 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 MFHAS1Q9Y4C4 1052 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 CASP8AP2Q9UKL3 1982 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 TRIM24O15164 1050 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 B4GALT3O60512 393 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 BMP2P12643 396 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 ADSLP30566 484 aaPredicted RBP16.31■□□□□ 0.2
LSP1-204ENST00000406638 TTKP33981 857 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 GRTP1Q5TC63 336 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 FAM183BPQ6ZVS7 135 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 RTN4RL1Q86UN2 441 aaPredicted RBP16.31■□□□□ 0.2
LSP1-204ENST00000406638 CAMK1DQ8IU85 385 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 SCUBE3Q8IX30 993 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 CCNYL1Q8N7R7 359 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 BPIFB6Q8NFQ5 453 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 URGCPQ8TCY9 931 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 RBBP8Q99708 897 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 CPNE1Q99829 537 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 C1orf50Q9BV19 199 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 UNKQ9C0B0 810 aaKnown RBP16.31■□□□□ 0.2
LSP1-204ENST00000406638 NANOGQ9H9S0 305 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 SLC27A5Q9Y2P5 690 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 CPQQ9Y646 472 aa16.31■□□□□ 0.2
LSP1-204ENST00000406638 SLC30A1Q9Y6M5 507 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms