RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CORO1AP31146 461 aaKnown RBP10.43□□□□□ -0.74
COL4A6-203ENST00000394872 NOMO3P69849 1222 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 CTBP1Q13363 440 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 PMF1Q6P1K2 205 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 ZNF248Q8NDW4 579 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 TBC1D14Q9P2M4 693 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 DEC1Q9P2X7 70 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 LEF1Q9UJU2 399 aaPredicted RBP10.43□□□□□ -0.74
COL4A6-203ENST00000394872 MTF2Q9Y483 593 aaPredicted RBP10.43□□□□□ -0.74
COL4A6-203ENST00000394872 NCANO14594 1321 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 PTPRJQ12913 1337 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 STX11O75558 287 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 ITGB5P18084 799 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 KLHL24Q6TFL4 600 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 UBE2R2Q712K3 238 aaPredicted RBP10.43□□□□□ -0.74
COL4A6-203ENST00000394872 SLC24A5Q71RS6 500 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 REM2Q8IYK8 340 aaPredicted RBP10.43□□□□□ -0.74
COL4A6-203ENST00000394872 SLAIN1Q8ND83 568 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 MBOAT7Q96N66 472 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 SAR1AQ9NR31 198 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 KCNE2Q9Y6J6 123 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 PAPSS1O43252 624 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 MIIPQ5JXC2 388 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 SLC25A24Q6NUK1 477 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 CHST9Q7L1S5 443 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 DNAJC19Q96DA6 116 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 CLEC4MQ9H2X3 399 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 STON1Q9Y6Q2 735 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 SPATA31D1Q6ZQQ2 1576 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 hCG_1818297A0A087WSY0 165 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 LRATO95237 230 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 NFATC1O95644 943 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 LINC00032P0C843 101 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 IDH2P48735 452 aaKnown RBP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 MRPS22P82650 360 aaKnown RBP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 PPIGQ13427 754 aaKnown RBP eCLIP10.42□□□□□ -0.745e-7■■■■■ 32.2
COL4A6-203ENST00000394872 SLC25A52Q3SY17 297 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 CLVS1Q8IUQ0 354 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 SLC9A9Q8IVB4 645 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 C8orf59Q8N0T1 100 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 DNAJB14Q8TBM8 379 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 AENQ8WTP8 325 aaKnown RBP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 SLC38A2Q96QD8 506 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 ACAT2Q9BWD1 397 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 ELL3Q9HB65 397 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 MCIDASD6RGH6 385 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 SCN2BO60939 215 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 CXCR3P49682 368 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 AIF1P55008 147 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 ATAT1Q5SQI0 421 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 OFCC1Q8IZS5 231 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 HEXDCQ8WVB3 486 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 VPS35Q96QK1 796 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 GSTK1Q9Y2Q3 226 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 MGRN1O60291 552 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 RNASEH2AO75792 299 aaKnown RBP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 MAPK10P53779 464 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 LPIN1Q14693 890 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 MAPK11Q15759 364 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 CPSF6Q16630 551 aaKnown RBP eCLIP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 LSM12Q3MHD2 195 aaKnown RBP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 RPTNQ6XPR3 784 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 GPR135Q8IZ08 494 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 ZCCHC7Q8N3Z6 543 aaKnown RBP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 ZFRQ96KR1 1074 aaKnown RBP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 BTN2A3PQ96KV6 586 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 PHPT1Q9NRX4 125 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 CLN6Q9NWW5 311 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 AP3D1O14617 1153 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 TREHO43280 583 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 AP5Z1O43299 807 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 SLC28A2O43868 658 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 CLDN11O75508 207 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 ITGA2P17301 1181 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 WARSP23381 471 aaKnown RBP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 BUD31P41223 144 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 SEC13P55735 322 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 RPL7AP62424 266 aaKnown RBP10.42□□□□□ -0.74
COL4A6-203ENST00000394872 ZDHHC20Q5W0Z9 365 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 KIAA0408Q6ZU52 694 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 CREG2Q8IUH2 290 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 KLHL31Q9H511 634 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 TOR4AQ9NXH8 423 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 PADI3Q9ULW8 664 aa10.42□□□□□ -0.74
COL4A6-203ENST00000394872 RASGRP1O95267 797 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 MAPKAPK2P49137 400 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 RTP1P59025 263 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 ITGB3BPQ13352 177 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 SF1Q15637 639 aaKnown RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 SH3RF1Q7Z6J0 888 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 ULK2Q8IYT8 1036 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 BEND7Q8N7W2 519 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 DLG3Q92796 817 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 MPP4Q96JB8 637 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 TRAPPC9Q96Q05 1148 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 KIFC1Q9BW19 673 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 DGCR6LQ9BY27 220 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 GRIP2Q9C0E4 1043 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms