RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 TRNAU1APQ9NX07 287 aaKnown RBP5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 SRPRBQ9Y5M8 271 aaKnown RBP5.59□□□□□ -1.51
RNU6-40P-201ENST00000384254 A0A1W2PPC1 479 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 SYNDIG1LA6NDD5 238 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 BTBD18B2RXH4 712 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 HCRTR2O43614 444 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 HS6ST1O60243 411 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 PPFIA2O75334 1257 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 BEST1O76090 585 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 NDUFB4O95168 129 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 SYF2O95926 243 aaKnown RBP5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 IFNA2P01563 188 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 MMP2P08253 660 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 AGAP20933 346 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 DCTDP32321 178 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 SHMT1P34896 483 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 UBA7P41226 1012 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 LMAN1P49257 510 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 ENTPD1P49961 510 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 ZBED6P86452 979 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 ACSM2AQ08AH3 577 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 NAE1Q13564 534 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 KRT24Q2M2I5 525 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 USP41Q3LFD5 358 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 Q4G0T1 1027 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 RAB41Q5JT25 222 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 MANEAQ5SRI9 462 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 C10orf25Q5T742 122 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 ACSM2BQ68CK6 577 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 GPR139Q6DWJ6 353 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 SHC4Q6S5L8 630 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 KRBA2Q6ZNG9 492 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 TRILQ7L0X0 811 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 NOXA1Q86UR1 476 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 KRTAP1-3Q8IUG1 177 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 MB21D2Q8IYB1 491 aaPredicted RBP5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 ZBTB2Q8N680 514 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 LSMEM1Q8N8F7 131 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 WDR77Q9BQA1 342 aaPredicted RBP5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 SLF1Q9BQI6 1058 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 TEX12Q9BXU0 123 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 IFIH1Q9BYX4 1025 aaKnown RBP5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 CYSLTR2Q9NS75 346 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 CISD1Q9NZ45 108 aaKnown RBP5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 PTGFRNQ9P2B2 879 aa5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 CNOT8Q9UFF9 292 aaKnown RBP5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.58□□□□□ -1.52
RNU6-40P-201ENST00000384254 A0A0G2JK05 382 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 FAM237AA0A1B0GTK4 181 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 KDM4EB2RXH2 506 aaPredicted RBP5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 IFNL4K9M1U5 179 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 PLOD3O60568 738 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 GJB3O75712 270 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 OR2C1O95371 312 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 CELA2AP08217 269 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 SRPRAP08240 638 aaKnown RBP5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 ACSL1P33121 698 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 IKQ13123 557 aaPredicted RBP5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 NEDD9Q14511 834 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 ADIPOQQ15848 244 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 SOWAHAQ2M3V2 549 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 CXorf66Q5JRM2 361 aaPredicted RBP5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 Q5PR19 223 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 PXDC1Q5TGL8 231 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 MORN5Q5VZ52 161 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 PARM1Q6UWI2 310 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 SLC16A12Q6ZSM3 486 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 LINGO2Q7L985 606 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 GPSM1Q86YR5 675 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 CCDC13Q8IYE1 715 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 TMEM163Q8TC26 289 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 IGFBPL1Q8WX77 278 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 SNAPC3Q92966 411 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 TKTL2Q9H0I9 626 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 TMPRSS5Q9H3S3 457 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 CATSPERBQ9H7T0 1116 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 SLC28A3Q9HAS3 691 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 PLSCR4Q9NRQ2 329 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 TUBA8Q9NY65 449 aaPredicted RBP5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 OGFRQ9NZT2 677 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 MRPL15Q9P015 296 aaKnown RBP5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 SUCLA2Q9P2R7 463 aaPredicted RBP5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 PCDHA12Q9UN75 941 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 PAM16Q9Y3D7 125 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 HS3ST3B1Q9Y662 390 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 CEPT1Q9Y6K0 416 aa5.57□□□□□ -1.52
RNU6-40P-201ENST00000384254 PASKQ96RG2 1323 aa5.56□□□□□ -1.52
RNU6-40P-201ENST00000384254 ZNF814B7Z6K7 855 aa5.56□□□□□ -1.52
RNU6-40P-201ENST00000384254 P4HA2O15460 535 aa5.56□□□□□ -1.52
RNU6-40P-201ENST00000384254 KLK8O60259 260 aa5.56□□□□□ -1.52
RNU6-40P-201ENST00000384254 GPC4O75487 556 aa5.56□□□□□ -1.52
RNU6-40P-201ENST00000384254 FGBP02675 491 aa5.56□□□□□ -1.52
RNU6-40P-201ENST00000384254 ACTN1P12814 892 aa5.56□□□□□ -1.52
RNU6-40P-201ENST00000384254 GABRB1P18505 474 aa5.56□□□□□ -1.52
RNU6-40P-201ENST00000384254 GPTP24298 496 aa5.56□□□□□ -1.52
RNU6-40P-201ENST00000384254 ME1P48163 572 aa5.56□□□□□ -1.52
RNU6-40P-201ENST00000384254 CXCR3P49682 368 aa5.56□□□□□ -1.52
RNU6-40P-201ENST00000384254 CAMPP49913 170 aa5.56□□□□□ -1.52
RNU6-40P-201ENST00000384254 PLCD1P51178 756 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms