RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 PRDM16Q9HAZ2 1276 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 AP4S1Q9Y587 144 aa12.99□□□□□ -0.33
USP11-204ENST00000377107 RAMP2O60895 175 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 SRP72O76094 671 aaKnown RBP12.98□□□□□ -0.33
USP11-204ENST00000377107 RHOBTB1O94844 696 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 ALOX15P16050 662 aaPredicted RBP12.98□□□□□ -0.33
USP11-204ENST00000377107 GRIA2P42262 883 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 ADAM17P78536 824 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 ROR2Q01974 943 aaKnown RBP12.98□□□□□ -0.33
USP11-204ENST00000377107 ZNF423Q2M1K9 1284 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 SLC5A9Q2M3M2 681 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 RAB41Q5JT25 222 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 PIK3R6Q5UE93 754 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 CWF19L1Q69YN2 538 aaKnown RBP12.98□□□□□ -0.33
USP11-204ENST00000377107 GLB1LQ6UWU2 654 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 BHLHA9Q7RTU4 235 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 RTL3Q8N8U3 475 aaKnown RBP12.98□□□□□ -0.33
USP11-204ENST00000377107 CALML6Q8TD86 181 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 TBC1D13Q9NVG8 400 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 PRPF19Q9UMS4 504 aaKnown RBP12.98□□□□□ -0.33
USP11-204ENST00000377107 GIT1Q9Y2X7 761 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 ASB3Q9Y575 518 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 A0A1B0GTW7 788 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 TCAF2A6NFQ2 919 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 RPL10P27635 214 aaKnown RBP12.98□□□□□ -0.33
USP11-204ENST00000377107 ARCN1P48444 511 aaKnown RBP12.98□□□□□ -0.33
USP11-204ENST00000377107 POU4F1Q01851 419 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 TUSC3Q13454 348 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 CMPK2Q5EBM0 449 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 FAM171A1Q5VUB5 890 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 RAB44Q7Z6P3 723 aaPredicted RBP12.98□□□□□ -0.33
USP11-204ENST00000377107 ABI1Q8IZP0 508 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 GALNT15Q8N3T1 639 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 DNAJB14Q8TBM8 379 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 RDH11Q8TC12 318 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 TMEM79Q9BSE2 394 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 ARHGAP39Q9C0H5 1083 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 COQ10BQ9H8M1 238 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 VCX3AQ9NNX9 186 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 UBAP1Q9NZ09 502 aa12.98□□□□□ -0.33
USP11-204ENST00000377107 GIPC1O14908 333 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 ANGPT2O15123 496 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 BNIP3LO60238 219 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 SNUPNO95149 360 aaKnown RBP12.97□□□□□ -0.33
USP11-204ENST00000377107 GLP2RO95838 553 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 ASGR1P07306 291 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 SLC2A3P11169 496 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 HOXD8P13378 290 aaPredicted RBP12.97□□□□□ -0.33
USP11-204ENST00000377107 RPL9P32969 192 aaKnown RBP12.97□□□□□ -0.33
USP11-204ENST00000377107 MAGEA12P43365 314 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 ADGRE1Q14246 886 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 CTXN3Q4LDR2 81 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 PIGGQ5H8A4 983 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 REP15Q6BDI9 236 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 TMEM151AQ8N4L1 468 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 WDR90Q96KV7 1748 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 TRAPPC9Q96Q05 1148 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 C1orf50Q9BV19 199 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.97□□□□□ -0.33
USP11-204ENST00000377107 DNAJB4Q9UDY4 337 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 CROTQ9UKG9 612 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 RAD54BQ9Y620 910 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 FGF10O15520 208 aaPredicted RBP12.97□□□□□ -0.33
USP11-204ENST00000377107 SNRPB2P08579 225 aaKnown RBP12.97□□□□□ -0.33
USP11-204ENST00000377107 RBP1P09455 135 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 CDKL1Q00532 357 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 LZTR1Q8N653 840 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 SPPL2BQ8TCT7 592 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 TSPAN17Q96FV3 270 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 SERPINB11Q96P15 392 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 MARCH2Q9P0N8 246 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 A0A087X1B8 175 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 ARHGEF37A1IGU5 675 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 ELNP15502 786 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 PSMC3P17980 439 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 ITGB6P18564 788 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 MLLT6P55198 1093 aaPredicted RBP12.97□□□□□ -0.33
USP11-204ENST00000377107 MAP7Q14244 749 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 PTPRRQ15256 657 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 SIRPB2Q5JXA9 342 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 ZBTB46Q86UZ6 589 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 HERC6Q8IVU3 1022 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 C2CD4AQ8NCU7 369 aaPredicted RBP12.97□□□□□ -0.33
USP11-204ENST00000377107 IGSF8Q969P0 613 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 LRCH3Q96II8 777 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 CCT7Q99832 543 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 ZYG11BQ9C0D3 744 aa12.97□□□□□ -0.33
USP11-204ENST00000377107 UPF3AQ9H1J1 476 aaKnown RBP12.97□□□□□ -0.33
USP11-204ENST00000377107 C6orf203Q9P0P8 240 aaPredicted RBP12.97□□□□□ -0.33
USP11-204ENST00000377107 HAS3O00219 553 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 TRIM38O00635 465 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 GOT2P00505 430 aaKnown RBP12.96□□□□□ -0.33
USP11-204ENST00000377107 MAPRE1Q15691 268 aaKnown RBP12.96□□□□□ -0.33
USP11-204ENST00000377107 RANBP10Q6VN20 620 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 ZBTB49Q6ZSB9 765 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 TAS2R42Q7RTR8 314 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 OR7D4Q8NG98 312 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 CNDP1Q96KN2 507 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 PDLIM1O00151 329 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 PRDX6P30041 224 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms