RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 RORBQ92753 470 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 SLC39A3Q9BRY0 314 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 MINDY3Q9H8M7 445 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 DTLQ9NZJ0 730 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 TMA7Q9Y2S6 64 aaKnown RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 ARL5AQ9Y689 179 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 LIMK2P53671 638 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 TNK2Q07912 1038 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 ITGA7Q13683 1181 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 PCLAFQ15004 111 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 DGUOKQ16854 277 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 NECAB2Q7Z6G3 386 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 ANKS1BQ7Z6G8 1248 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 ZDHHC13Q8IUH4 622 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 CBR4Q8N4T8 237 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 SLC35B2Q8TB61 432 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 PIWIL1Q96J94 861 aaKnown RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 VAT1Q99536 393 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 CCDC106Q9BWC9 280 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 PLGRKTQ9HBL7 147 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 CAB39Q9Y376 341 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-202ENST00000375340 PCDHB5Q9Y5E4 795 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 PCDHB12Q9Y5F1 795 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 TRPV2Q9Y5S1 764 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 U3KQV3 271 aa6.57□□□□□ -1.36
SMC1A-202ENST00000375340 SLC16A1P53985 500 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 MOGSQ13724 837 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 GALNT18Q6P9A2 607 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 CNSTQ6PJW8 725 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ARHGAP36Q6ZRI8 547 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ZFP42Q96MM3 310 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 SEMA3CQ99985 751 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 RHOJQ9H4E5 214 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ZFYVE28Q9HCC9 887 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 PCDHB8Q9UN66 801 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 TEX264Q9Y6I9 313 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 E9PAM4 449 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 RGS14O43566 566 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 CNPP09543 421 aaKnown RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 PRDX6P30041 224 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 CLCNKBP51801 687 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 POU5F1Q01860 360 aaKnown RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 CSTF3Q12996 717 aaKnown RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 CARTPTQ16568 116 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 RGS21Q2M5E4 152 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ANKS6Q68DC2 871 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 FAM151BQ6UXP7 276 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 GPRIN3Q6ZVF9 776 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ZNF467Q7Z7K2 595 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 SIDT2Q8NBJ9 832 aaKnown RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 FBXO27Q8NI29 283 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 CAPSLQ8WWF8 208 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 AGO3Q9H9G7 860 aaKnown RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ABCB10Q9NRK6 738 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 SELENONQ9NZV5 590 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ZDHHC2Q9UIJ5 367 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 TYROBPO43914 113 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 COX7A2P14406 83 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ALDH9A1P49189 494 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 SPIDRQ14159 915 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 STARD3Q14849 445 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 STXBP5Q5T5C0 1151 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ZNF549Q6P9A3 640 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ZDHHC14Q8IZN3 488 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 POLR1EQ9GZS1 481 aaKnown RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 MGAT4DA6NG13 374 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 OR51F1A6NGY5 319 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 TBKBP1A7MCY6 615 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 H7C4K7 107 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 NOBOXO60393 691 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 XRCC1P18887 633 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 YWHAQP27348 245 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 YAP1P46937 504 aaKnown RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 RUNX1T1Q06455 604 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 TRAF3Q13114 568 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 CRY1Q16526 586 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 AFTPHQ6ULP2 937 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 SPPL2AQ8TCT8 520 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 HMCESQ96FZ2 354 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ZDHHC6Q9H6R6 413 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 SH3BP4Q9P0V3 963 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 CIDEBQ9UHD4 219 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 CYTH4Q9UIA0 394 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 SLC25A13Q9UJS0 675 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 CLCA2Q9UQC9 943 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 DPYSL4O14531 572 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 IPO13O94829 963 aaKnown RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 BRCC3P46736 316 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 TIGD2Q4W5G0 525 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 CROCCP3Q8IVE0 287 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ACTRT2Q8TDY3 377 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 C7orf43Q8WVR3 580 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 HPS1Q92902 700 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 SLC2A6Q9UGQ3 507 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 CDH9Q9ULB4 789 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 NRCAMQ92823 1304 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 STRCP1A6NGW2 1772 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 FAM159BA6NKW6 160 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 NPM3O75607 178 aaKnown RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 TRMUO75648 421 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms