RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 PEX11AO75192 247 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 TSPAN9O75954 239 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 RARAP10276 462 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 SLC25A3Q00325 362 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 POU5F1Q01860 360 aaKnown RBP14.38□□□□□ -0.11
TRAF1-201ENST00000373887 SPIBQ01892 262 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 CRHR2Q13324 411 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 TMEM63BQ5T3F8 832 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 TMC3Q7Z5M5 1100 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 LRRC17Q8N6Y2 441 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 ATAD1Q8NBU5 361 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 KBTBD7Q8WVZ9 684 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 PANX3Q96QZ0 392 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 FAM129BQ96TA1 746 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 SNX6Q9UNH7 406 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 SCAMP1O15126 338 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 ZW10O43264 779 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 CHN2P52757 468 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 STXBP1P61764 594 aaKnown RBP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 GTF2BQ00403 316 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 SCIMPQ6UWF3 145 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 CAVIN3Q969G5 261 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 CXorf40BQ96DE9 158 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 MROH1Q8NDA8 1641 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 A0A088AWK7 358 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 CDC40O60508 579 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 ZNF10P21506 573 aaPredicted RBP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 SLC26A3P40879 764 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 PAGE2BQ5JRK9 111 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 LZTR1Q8N653 840 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 APBB2Q92870 758 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 MLPHQ9BV36 600 aaPredicted RBP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 ZYG11BQ9C0D3 744 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 ANKZF1Q9H8Y5 726 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 NEUROD4Q9HD90 331 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 KLF15Q9UIH9 416 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 RWDD3Q9Y3V2 267 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 C1QTNF3-AMACRE9PGA6 284 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 NOS1APO75052 506 aaPredicted RBP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 KDELR1P24390 212 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 ADRA1DP25100 572 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 PPM1AP35813 382 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 C9orf57Q5W0N0 161 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 PSRC1Q6PGN9 363 aaPredicted RBP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 CRTC3Q6UUV7 619 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 KLHL23Q8NBE8 558 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 RAD51AP1Q96B01 352 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 MAML3Q96JK9 1138 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 FBXO6Q9NRD1 293 aaPredicted RBP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 SLC12A4Q9UP95 1085 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 PPP1R11O60927 126 aaPredicted RBP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 PGM3O95394 542 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 GOT1P17174 413 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 RPL17P18621 184 aaKnown RBP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 RPL14P50914 215 aaKnown RBP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 SPESP1Q6UW49 350 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 SMG7Q92540 1137 aaKnown RBP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 TRNT1Q96Q11 434 aaKnown RBP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 SLC38A2Q96QD8 506 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 TCF25Q9BQ70 676 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 ING4Q9UNL4 249 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 GSAPA4D1B5 854 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 KLRG2A4D1S0 409 aaPredicted RBP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 ZNF879B4DU55 563 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 CYP1A1P04798 512 aaPredicted RBP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 CHKAP35790 457 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 NR2C2P49116 596 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 MSLNQ13421 630 aaPredicted RBP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 TOP3AQ13472 1001 aaPredicted RBP14.37□□□□□ -0.11
TRAF1-201ENST00000373887 ZNF846Q147U1 533 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 SLC51AQ86UW1 340 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 STARD8Q92502 1023 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 CHST7Q9NS84 486 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 TRHDEQ9UKU6 1024 aa14.37□□□□□ -0.11
TRAF1-201ENST00000373887 PRKAA2P54646 552 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 PACS2Q86VP3 889 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 ATXN2LQ8WWM7 1075 aaKnown RBP14.36□□□□□ -0.11
TRAF1-201ENST00000373887 TRBV23OR9-2A0A075B6M9 112 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 ABHD14A-ACY1A0A1B0GW23 586 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 IL12AP29459 219 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 TGFBR2P37173 567 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 ABRQ12979 859 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 MADCAM1Q13477 382 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 MAMLD1Q13495 774 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 BROXQ5VW32 411 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 PPP2R2DQ66LE6 453 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 DEF8Q6ZN54 512 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 UNC93AQ86WB7 457 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 PRKD2Q9BZL6 878 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 A0A0B4J269 797 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 ACLYP53396 1101 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 IL18R1Q13478 541 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 CNSTQ6PJW8 725 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 POLNQ7Z5Q5 900 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 WDR60Q8WVS4 1066 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 NDNQ99608 321 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 SNRNP25Q9BV90 132 aaKnown RBP14.36□□□□□ -0.11
TRAF1-201ENST00000373887 SYNPO2Q9UMS6 1093 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 PHLPP1O60346 1717 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms