RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ANKRD60Q9BZ19 345 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 TRIM8Q9BZR9 551 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 SLA2Q9H6Q3 261 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 IFT22Q9H7X7 185 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 NRBP2Q9NSY0 501 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 RBAKQ9NYW8 714 aaPredicted RBP8.91□□□□□ -0.98
ATG4A-203ENST00000372232 SLC17A7Q9P2U7 560 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 CSADQ9Y600 493 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 WDR81Q562E7 1941 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 DOCK5Q9H7D0 1870 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 ADGRA2Q96PE1 1338 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 LCTP09848 1927 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 ATP6V1G2-DDX39BF2Z307 99 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 SPOPO43791 374 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 VNN1O95497 513 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 EDN1P05305 212 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 UGT2B4P06133 528 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 GRIA3P42263 894 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 ETV4P43268 484 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 ALDH18A1P54886 795 aaKnown RBP8.91□□□□□ -0.98
ATG4A-203ENST00000372232 EIF3EP60228 445 aaKnown RBP8.91□□□□□ -0.98
ATG4A-203ENST00000372232 ITKQ08881 620 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 TARDBPQ13148 414 aaKnown RBP eCLIP8.91□□□□□ -0.98
ATG4A-203ENST00000372232 SNTA1Q13424 505 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 HERC3Q15034 1050 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 ZBTB41Q5SVQ8 909 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 ZNF677Q86XU0 584 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 ARMC8Q8IUR7 673 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 ADGRG5Q8IZF4 528 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 MCOLN2Q8IZK6 566 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 CLYBLQ8N0X4 340 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 BCL7CQ8WUZ0 217 aaPredicted RBP8.91□□□□□ -0.98
ATG4A-203ENST00000372232 TTC17Q96AE7 1141 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 TUBA1CQ9BQE3 449 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 MSTO1Q9BUK6 570 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 MTMR12Q9C0I1 747 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 NAA50Q9GZZ1 169 aaKnown RBP8.91□□□□□ -0.98
ATG4A-203ENST00000372232 IL21Q9HBE4 155 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 PTPRHQ9HD43 1115 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 UGT2A1Q9Y4X1 527 aa8.91□□□□□ -0.98
ATG4A-203ENST00000372232 HDAC3O15379 428 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 SIAH2O43255 324 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 MAFO75444 373 aaPredicted RBP8.9□□□□□ -0.98
ATG4A-203ENST00000372232 RFPL2O75678 378 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 DDNO94850 711 aaPredicted RBP8.9□□□□□ -0.98
ATG4A-203ENST00000372232 PAHP00439 452 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 PROCP04070 461 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 NTRK1P04629 796 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 ITGAXP20702 1163 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 ACO1P21399 889 aaKnown RBP8.9□□□□□ -0.98
ATG4A-203ENST00000372232 BGNP21810 368 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 MAP4P27816 1152 aaKnown RBP8.9□□□□□ -0.98
ATG4A-203ENST00000372232 POU6F2P78424 691 aaPredicted RBP8.9□□□□□ -0.98
ATG4A-203ENST00000372232 NME3Q13232 169 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 CAPSQ13938 189 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 UBAP2LQ14157 1087 aaKnown RBP8.9□□□□□ -0.98
ATG4A-203ENST00000372232 NFE2L1Q14494 772 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 CCDC142Q17RM4 750 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 LEXMQ3ZCV2 418 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 CYP4F22Q6NT55 531 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 CYP20A1Q6UW02 462 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 METTL7BQ6UX53 244 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 GADL1Q6ZQY3 521 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 TMEM102Q8N9M5 508 aaPredicted RBP8.9□□□□□ -0.98
ATG4A-203ENST00000372232 PSD4Q8NDX1 1056 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 ABHD11Q8NFV4 315 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 SLC2A14Q8TDB8 520 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 GRK7Q8WTQ7 553 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 S100ZQ8WXG8 99 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 JPH3Q8WXH2 748 aaPredicted RBP8.9□□□□□ -0.98
ATG4A-203ENST00000372232 SEPT1Q8WYJ6 367 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 EXOC2Q96KP1 924 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 ZNF560Q96MR9 790 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 PKP2Q99959 881 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 TMEM79Q9BSE2 394 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 YIPF4Q9BSR8 244 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 EFHD1Q9BUP0 239 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 COPS7BQ9H9Q2 264 aaPredicted RBP8.9□□□□□ -0.98
ATG4A-203ENST00000372232 GPN2Q9H9Y4 310 aaPredicted RBP8.9□□□□□ -0.98
ATG4A-203ENST00000372232 APOBEC3GQ9HC16 384 aaKnown RBP8.9□□□□□ -0.98
ATG4A-203ENST00000372232 FETUBQ9UGM5 382 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 VPS4AQ9UN37 437 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 PCDHB10Q9UN67 800 aa8.9□□□□□ -0.98
ATG4A-203ENST00000372232 CNTNAP2Q9UHC6 1331 aa8.9□□□□□ -0.99
ATG4A-203ENST00000372232 A0A0G2JLL6 359 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-203ENST00000372232 SDR42E2A6NKP2 422 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 ADM5C9JUS6 153 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 AURKAO14965 403 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 ALDH1A2O94788 518 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 NADKO95544 446 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-203ENST00000372232 EDN3P14138 238 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 GSTM2P28161 218 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 EPHA3P29320 983 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 PIN1Q13526 163 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-203ENST00000372232 CUL2Q13617 745 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 TAF5Q15542 800 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 LY6KQ17RY6 165 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 C5orf22Q49AR2 442 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 EFHC2Q5JST6 749 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 FAM160B1Q5W0V3 765 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms