RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 PEX6Q13608 980 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 SHROOM1Q2M3G4 852 aaPredicted RBP17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 RNF180Q86T96 592 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 OR2T12Q8NG77 320 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 GAD1Q99259 594 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 UNC93B1Q9H1C4 597 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 TUBA8Q9NY65 449 aaPredicted RBP17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 COL5A2P05997 1499 aaPredicted RBP17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 B4GALT5O43286 388 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 IPO13O94829 963 aaKnown RBP17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 ATP12AP54707 1039 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 DLG2Q15700 870 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 CBR4Q8N4T8 237 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 CXorf21Q9HAI6 301 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 TMEM165Q9HC07 324 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 SMPD3Q9NY59 655 aaPredicted RBP17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 SLC28A1O00337 649 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 DARSP14868 501 aaKnown RBP17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 ADSLP30566 484 aaPredicted RBP17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 SLC39A12Q504Y0 691 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 PAGE2BQ5JRK9 111 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 CELF3Q5SZQ8 465 aaKnown RBP17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 MZT2AQ6P582 158 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 ADAMTSL2Q86TH1 951 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 GPR180Q86V85 440 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 OOSP2Q86WS3 158 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 TRIM8Q9BZR9 551 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 ACSS2Q9NR19 701 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 PSEN1P49768 467 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 WNT3AP56704 352 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 THAP5Q7Z6K1 395 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 CPSF7Q8N684 471 aaKnown RBP17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 SLC47A1Q96FL8 570 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 Q96MT0 163 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 ST6GALNAC4Q9H4F1 302 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 PPP2R3BQ9Y5P8 575 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 TTLL13PA6NNM8 815 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 IDH3AP50213 366 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 LIMK2P53671 638 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 SRP54P61011 504 aaKnown RBP17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 ITGA7Q13683 1181 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 SLC25A52Q3SY17 297 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 ARMC7Q9H6L4 198 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 DOLKQ9UPQ8 538 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 MAPRE3Q9UPY8 281 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 ARMC6Q6NXE6 501 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 KLHL23Q8NBE8 558 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 GLIS2Q9BZE0 524 aaPredicted RBP17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 SMPD4Q9NXE4 827 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 PCDHB12Q9Y5F1 795 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 SPATA31A6Q5VVP1 1343 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 IFRD1O00458 451 aaPredicted RBP17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 HOXA2O43364 376 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 IGSF6O95976 241 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 TGM3Q08188 693 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 GALNT18Q6P9A2 607 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 LCLAT1Q6UWP7 414 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 TRMT13Q9NUP7 481 aaKnown RBP17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 DMAC2Q9NW81 257 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 SPATA31C2B4DYI2 1134 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 ALDH2P05091 517 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 CD48P09326 243 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 CYP4B1P13584 511 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 GSCP56915 257 aaPredicted RBP17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 LSM12Q3MHD2 195 aaKnown RBP17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 GLYATQ6IB77 296 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 ZNF781Q8N8C0 355 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 B3GNT5Q9BYG0 378 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 ASB8Q9H765 288 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 RCOR3Q9P2K3 495 aaPredicted RBP17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 SLC7A8Q9UHI5 535 aa17.19■□□□□ 0.34
PTP4A1-201ENST00000370651 ITGA2P17301 1181 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 MAXP61244 160 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 MFSD10Q14728 455 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 ZYG11AQ6WRX3 759 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 MACC1Q6ZN28 852 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 NXNL1Q96CM4 212 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 OR52E6Q96RD3 313 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 GATA5Q9BWX5 397 aaPredicted RBP17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 ZYG11BQ9C0D3 744 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 DNAJB4Q9UDY4 337 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 TMEM59LQ9UK28 342 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 FAM149AA5PLN7 773 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 MATN2O00339 956 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 WARSP23381 471 aaKnown RBP17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 ARL4DP49703 201 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 TEX44Q53QW1 395 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 RAP1GAP2Q684P5 730 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 UBR7Q8N806 425 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 NELL1Q92832 810 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 ADGRE2Q9UHX3 823 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 PIRTP0C851 137 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 RPS9P46781 194 aaKnown RBP17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 IKBIPQ70UQ0 350 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 TRIM48Q8IWZ4 208 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 LRTOMTQ8WZ04 291 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 QKIQ96PU8 341 aaKnown RBP eCLIP17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 CIPCQ9C0C6 399 aa17.18■□□□□ 0.34
PTP4A1-201ENST00000370651 KANSL3Q9P2N6 904 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms