RNA–Protein interactions for RNA: ENST00000367364.5

PTPRC-202, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-202ENST00000367364 HMGXB3Q12766 1538 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 EFCAB6Q5THR3 1501 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 ASXL1Q8IXJ9 1541 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 A0A0G2JPF8 293 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 ANKRD18BA2A2Z9 1011 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 PMS2P5A8MQ11 134 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 VSTM5A8MXK1 200 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 HNRNPCL3B7ZW38 293 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 CTAGE5O15320 804 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 AP5Z1O43299 807 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 HNRNPCL1O60812 293 aaKnown RBP3.86□□□□□ -1.79
PTPRC-202ENST00000367364 PNMA6AP0CW24 399 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-202ENST00000367364 HNRNPCL4P0DMR1 293 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 LIFRP42702 1097 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 SSR1P43307 286 aaKnown RBP3.86□□□□□ -1.79
PTPRC-202ENST00000367364 STT3AP46977 705 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 TDO2P48775 406 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 GRIK3Q13003 919 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 TNFAIP1Q13829 316 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 ZSCAN26Q16670 478 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 TTC31Q49AM3 519 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-202ENST00000367364 DNAJC21Q5F1R6 531 aaKnown RBP3.86□□□□□ -1.79
PTPRC-202ENST00000367364 ZNF569Q5MCW4 686 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 RINT1Q6NUQ1 792 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 CADM4Q8NFZ8 388 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 ALG14Q96F25 216 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 PSMD1Q99460 953 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 UTP14AQ9BVJ6 771 aaKnown RBP3.86□□□□□ -1.79
PTPRC-202ENST00000367364 MVB12BQ9H7P6 319 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 CWC15Q9P013 229 aaKnown RBP3.86□□□□□ -1.79
PTPRC-202ENST00000367364 STK26Q9P289 416 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 VDAC3Q9Y277 283 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 SNX9Q9Y5X1 595 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 PRSS21Q9Y6M0 314 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 RPS6KL1Q9Y6S9 549 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 ELP1O95163 1332 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 CARMIL1Q5VZK9 1371 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 ABCC5O15440 1437 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 NOS1P29475 1434 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 PRAG1Q86YV5 1406 aa3.86□□□□□ -1.79
PTPRC-202ENST00000367364 URB2Q14146 1524 aaKnown RBP3.85□□□□□ -1.79
PTPRC-202ENST00000367364 IQGAP2Q13576 1575 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 HECW2Q9P2P5 1572 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 SYCE3A1L190 88 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 NPIPB13A6NJU9 1138 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 NPIPB5A8MRT5 1133 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 NPIPB4C9JG80 1138 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 RTN2O75298 545 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 ADCY5O95622 1261 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 GSTM2P28161 218 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 AKT1P31749 480 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 TPM4P67936 248 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 IRX1P78414 480 aaPredicted RBP3.85□□□□□ -1.79
PTPRC-202ENST00000367364 ECT2LQ008S8 904 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 ICA1Q05084 483 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 FAM27E3Q08E93 113 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 CUL4AQ13619 759 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 ZNF239Q16600 458 aaKnown RBP3.85□□□□□ -1.79
PTPRC-202ENST00000367364 ARL13BQ3SXY8 428 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 ZNF876PQ49A33 203 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 CCDC30Q5VVM6 783 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 NFE4Q86UQ8 179 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 TMC8Q8IU68 726 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 C17orf53Q8N3J3 647 aaPredicted RBP3.85□□□□□ -1.79
PTPRC-202ENST00000367364 SRBD1Q8N5C6 995 aaKnown RBP3.85□□□□□ -1.79
PTPRC-202ENST00000367364 ZNF248Q8NDW4 579 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 DMBX1Q8NFW5 382 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 SMARCE1Q969G3 411 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 C3orf30Q96M34 536 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 TESK2Q96S53 571 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 SLX1AQ9BQ83 275 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 RWDD1Q9H446 243 aaPredicted RBP3.85□□□□□ -1.79
PTPRC-202ENST00000367364 NECTIN3Q9NQS3 549 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 OR6C3Q9NZP0 311 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 HERC5Q9UII4 1024 aaKnown RBP3.85□□□□□ -1.79
PTPRC-202ENST00000367364 MSH6P52701 1360 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 RPAP1Q9BWH6 1393 aaPredicted RBP3.85□□□□□ -1.79
PTPRC-202ENST00000367364 SYNJ2O15056 1496 aa3.85□□□□□ -1.79
PTPRC-202ENST00000367364 INO80Q9ULG1 1556 aaPredicted RBP3.85□□□□□ -1.79
PTPRC-202ENST00000367364 KNDC1Q76NI1 1749 aa3.84□□□□□ -1.79
PTPRC-202ENST00000367364 A0A1W2PS18 150 aa3.84□□□□□ -1.79
PTPRC-202ENST00000367364 ERICH4A6NGS2 130 aa3.84□□□□□ -1.79
PTPRC-202ENST00000367364 LILRA5A6NI73 299 aa3.84□□□□□ -1.79
PTPRC-202ENST00000367364 KIF2AO00139 706 aaPredicted RBP3.84□□□□□ -1.79
PTPRC-202ENST00000367364 GRM8O00222 908 aa3.84□□□□□ -1.79
PTPRC-202ENST00000367364 IVLP07476 585 aa3.84□□□□□ -1.79
PTPRC-202ENST00000367364 HARSP12081 509 aaKnown RBP3.84□□□□□ -1.79
PTPRC-202ENST00000367364 CALRP27797 417 aaKnown RBP3.84□□□□□ -1.79
PTPRC-202ENST00000367364 ACTN2P35609 894 aa3.84□□□□□ -1.79
PTPRC-202ENST00000367364 MAP2K2P36507 400 aa3.84□□□□□ -1.79
PTPRC-202ENST00000367364 TNNT3P45378 269 aaPredicted RBP3.84□□□□□ -1.79
PTPRC-202ENST00000367364 MRPL12P52815 198 aaKnown RBP3.84□□□□□ -1.79
PTPRC-202ENST00000367364 RARSP54136 660 aaKnown RBP3.84□□□□□ -1.79
PTPRC-202ENST00000367364 DRG2P55039 364 aaKnown RBP3.84□□□□□ -1.79
PTPRC-202ENST00000367364 NUCB1Q02818 461 aa3.84□□□□□ -1.79
PTPRC-202ENST00000367364 CDK18Q07002 472 aa3.84□□□□□ -1.79
PTPRC-202ENST00000367364 PMS2P11Q13670 270 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms