RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 MPP6Q9NZW5 540 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 CDC14AQ9UNH5 594 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 GTF2A1LQ9UNN4 478 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 NAALADL1Q9UQQ1 740 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 PCDHGB1Q9Y5G3 927 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 IGLV5-37A0A075B6J1 123 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 BTBD18B2RXH4 712 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 TAF4O00268 1085 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 NPHP1O15259 732 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 MTA2O94776 668 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 SEC31AO94979 1220 aaKnown RBP3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 AFPP02771 609 aaKnown RBP3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 MMP2P08253 660 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 ATP1A3P13637 1013 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 CHATP28329 748 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 HNRNPH1P31943 449 aaKnown RBP3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 ABCD1P33897 745 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 BRWD1-AS2P59051 145 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 SF3B4Q15427 424 aaKnown RBP eCLIP3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 TCTN1Q2MV58 587 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 PAPPA-AS1Q5QFB9 102 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 LCTLQ6UWM7 567 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 DLK2Q6UY11 383 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 C18orf65Q6ZTR6 163 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 IL17REQ8NFR9 667 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 NFKBIDQ8NI38 313 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 ZUFSPQ96AP4 578 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 LMLNQ96KR4 655 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 ESRP2Q9H6T0 727 aaKnown RBP3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 BPIFA1Q9NP55 256 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 UBN1Q9NPG3 1134 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 MKKSQ9NPJ1 570 aaPredicted RBP3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 PCDHB16Q9NRJ7 776 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 PGAP2Q9UHJ9 254 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 A4GNTQ9UNA3 340 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 CAMK2AQ9UQM7 478 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 SNX9Q9Y5X1 595 aa3.26□□□□□ -1.89
RNU4-48P-201ENST00000365559 CCDC189A1A4V9 331 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 PRSS44E7EML9 344 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 SEC14L5O43304 696 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 CREB3O43889 395 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 NDUFS7O75251 213 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 CYC1P08574 325 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 IGHV4-30-4P0DP06 118 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 IRF1P10914 325 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 G6PDP11413 515 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 GPTP24298 496 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 EPHA8P29322 1005 aaPredicted RBP3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 EIF2S3P41091 472 aaKnown RBP3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 GNAQP50148 359 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 RRP1P56182 461 aaKnown RBP3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 EEF1A2Q05639 463 aaKnown RBP3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 NEXNQ0ZGT2 675 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 DLG1Q12959 904 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 COASYQ13057 564 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 NEDD9Q14511 834 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 SLC39A14Q15043 492 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 C2orf68Q2NKX9 166 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 ACAD10Q6JQN1 1059 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 NEK10Q6ZWH5 1172 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 LINGO2Q7L985 606 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 SLC46A3Q7Z3Q1 461 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 FOXRED2Q8IWF2 684 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 ZBTB2Q8N680 514 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 SCCPDHQ8NBX0 429 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 SMRP1Q8NCR6 262 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 AGBL3Q8NEM8 1001 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 BEST2Q8NFU1 509 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 CADM4Q8NFZ8 388 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 HUS1BQ8NHY5 278 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 CREB3L4Q8TEY5 395 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 RND1Q92730 232 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 ADGRG7Q96K78 797 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 ZNF570Q96NI8 536 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 NR1H4Q96RI1 486 aaPredicted RBP3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 HAUS8Q9BT25 410 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 H2AFJQ9BTM1 129 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 MMTAG2Q9BU76 263 aaKnown RBP3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 C1QTNF4Q9BXJ3 329 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 KCNN2Q9H2S1 579 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 DDX31Q9H8H2 851 aaKnown RBP3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 MALT1Q9UDY8 824 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 SLCO3A1Q9UIG8 710 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 FBXO9Q9UK97 447 aaPredicted RBP3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 NFS1Q9Y697 457 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 STON1Q9Y6Q2 735 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 SCINQ9Y6U3 715 aa3.25□□□□□ -1.89
RNU4-48P-201ENST00000365559 KDM3AQ9Y4C1 1321 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 A0A1B0GUV1 79 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 PLSCR5A0PG75 271 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 TMEM202A6NGA9 273 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 SMTNL1A8MU46 457 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 SOCS6O14544 535 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 KDM4BO94953 1096 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 CLDN14O95500 239 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 CD58P19256 250 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 STX2P32856 288 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 HARS2P49590 506 aaKnown RBP3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 PEX5P50542 639 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 KRTAP10-9P60411 292 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms