RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 FAM160A2Q8N612 972 aaPredicted RBP15.31■□□□□ 0.04
TPM1-206ENST00000358278 LRFN3Q9BTN0 628 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 FAM126AQ9BYI3 521 aaPredicted RBP15.31■□□□□ 0.04
TPM1-206ENST00000358278 SGK2Q9HBY8 427 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 ITM2BQ9Y287 266 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 SNX24Q9Y343 169 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 CACNA1HO95180 2353 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 IGHV1OR15-9A0A0B4J2B8 117 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 TCRBV7S3A2A0A539 114 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 CAPN8A6NHC0 703 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 A8MX80 341 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 RIOK3O14730 519 aaKnown RBP15.31■□□□□ 0.04
TPM1-206ENST00000358278 NDC80O14777 642 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 GALR2O43603 387 aaPredicted RBP15.31■□□□□ 0.04
TPM1-206ENST00000358278 PLRG1O43660 514 aaKnown RBP15.31■□□□□ 0.04
TPM1-206ENST00000358278 SEC31AO94979 1220 aaKnown RBP15.31■□□□□ 0.04
TPM1-206ENST00000358278 PCDH8O95206 1070 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 SLU7O95391 586 aaKnown RBP15.31■□□□□ 0.04
TPM1-206ENST00000358278 IVDP26440 423 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 CD6P30203 668 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 ACSL1P33121 698 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 MAGEA6P43360 314 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 NUBP1P53384 320 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 SEMG2Q02383 582 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 CALCOCO2Q13137 446 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 TEX35Q5T0J7 233 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 RNASEH2BQ5TBB1 312 aaKnown RBP15.31■□□□□ 0.04
TPM1-206ENST00000358278 ANKRD22Q5VYY1 191 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 WDR5BQ86VZ2 330 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 OR52K1Q8NGK4 314 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 FAM131CQ96AQ9 280 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 SCRN2Q96FV2 425 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 TOE1Q96GM8 510 aaKnown RBP15.31■□□□□ 0.04
TPM1-206ENST00000358278 PIH1D1Q9NWS0 290 aaKnown RBP15.31■□□□□ 0.04
TPM1-206ENST00000358278 B4GALT6Q9UBX8 382 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 GGT7Q9UJ14 662 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 INVSQ9Y283 1065 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 FADS3Q9Y5Q0 445 aa15.31■□□□□ 0.04
TPM1-206ENST00000358278 ZNF106Q9H2Y7 1883 aaKnown RBP15.3■□□□□ 0.04
TPM1-206ENST00000358278 NPIPB15A6NHN6 443 aaPredicted RBP15.3■□□□□ 0.04
TPM1-206ENST00000358278 LRRC72A6NJI9 287 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 GOLGA8MH3BSY2 632 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 AREL1O15033 823 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 AP1G1O43747 822 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 NDUFS2O75306 463 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 TMEM63AO94886 807 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 SEMA4FO95754 770 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 PIRTP0C851 137 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 ITIH2P19823 946 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 HNF1BP35680 557 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 MMP12P39900 470 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 GRIA1P42261 906 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 TAS2R38P59533 333 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 CDH17Q12864 832 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 ARHGEF7Q14155 803 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 MORF4L2Q15014 288 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 MAP7D1Q3KQU3 841 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 ZNF528Q3MIS6 628 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 DUPD1Q68J44 220 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 HOOK3Q86VS8 718 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 NAT8LQ8N9F0 302 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 BBOF1Q8ND07 529 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 BLOC1S5Q8TDH9 187 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 SMIM14Q96QK8 99 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 MCCC1Q96RQ3 725 aaPredicted RBP15.3■□□□□ 0.04
TPM1-206ENST00000358278 HINFPQ9BQA5 517 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 KDM4CQ9H3R0 1056 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 SHOC2Q9UQ13 582 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 PPIL1Q9Y3C6 166 aa15.3■□□□□ 0.04
TPM1-206ENST00000358278 TBC1D3DA0A087WVF3 549 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 TBC1D3IA0A087WXS9 549 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 TBC1D3EA0A087X179 549 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 TBC1D3KA0A087X1G2 549 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 C1orf232A0A0U1RR37 186 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 TBC1D3FA6NER0 549 aaPredicted RBP15.29■□□□□ 0.04
TPM1-206ENST00000358278 TBC1D3LB9A6J9 549 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 SPINT1O43278 529 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 TSPAN6O43657 245 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 SLC4A1P02730 911 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 RHOXF2BP0C7M4 288 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 TBC1D3HP0C7X1 549 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 SP9P0CG40 484 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 VIPR1P32241 457 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 ITGA8P53708 1063 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 GUCY2DQ02846 1103 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 PTPRRQ15256 657 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 TBC1D3GQ6DHY5 549 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 TBC1D3CQ6IPX1 549 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 DPPA4Q7L190 304 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 TBC1D3Q8IZP1 549 aaPredicted RBP15.29■□□□□ 0.04
TPM1-206ENST00000358278 FRMD1Q8N878 549 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 OR2T34Q8NGX1 318 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 CXorf40AQ8TE69 158 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 SRPK1Q96SB4 655 aaKnown RBP15.29■□□□□ 0.04
TPM1-206ENST00000358278 RHOXF2Q9BQY4 288 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 WRAP53Q9BUR4 548 aaKnown RBP15.29■□□□□ 0.04
TPM1-206ENST00000358278 ARNT2Q9HBZ2 717 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 PREBQ9HCU5 417 aa15.29■□□□□ 0.04
TPM1-206ENST00000358278 RRAGDQ9NQL2 400 aaPredicted RBP15.29■□□□□ 0.04
TPM1-206ENST00000358278 WSB2Q9NYS7 404 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms