RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 ECHS1P30084 290 aa8.1□□□□□ -1.11
UBE4B-202ENST00000343090 ADRA1BP35368 520 aa8.1□□□□□ -1.11
UBE4B-202ENST00000343090 ATP5C1P36542 298 aaKnown RBP8.1□□□□□ -1.11
UBE4B-202ENST00000343090 NDUFV1P49821 464 aa8.1□□□□□ -1.11
UBE4B-202ENST00000343090 RALGDSQ12967 914 aa8.1□□□□□ -1.11
UBE4B-202ENST00000343090 MAD2L1Q13257 205 aaPredicted RBP8.1□□□□□ -1.11
UBE4B-202ENST00000343090 CA9Q16790 459 aa8.1□□□□□ -1.11
UBE4B-202ENST00000343090 TXNRD3NBQ6F5E7 133 aa8.1□□□□□ -1.11
UBE4B-202ENST00000343090 SYT12Q8IV01 421 aa8.1□□□□□ -1.11
UBE4B-202ENST00000343090 GRIN3AQ8TCU5 1115 aa8.1□□□□□ -1.11
UBE4B-202ENST00000343090 MTERF3Q96E29 417 aa8.1□□□□□ -1.11
UBE4B-202ENST00000343090 MFSD3Q96ES6 412 aa8.1□□□□□ -1.11
UBE4B-202ENST00000343090 AAASQ9NRG9 546 aa8.1□□□□□ -1.11
UBE4B-202ENST00000343090 ABCB10Q9NRK6 738 aa8.1□□□□□ -1.11
UBE4B-202ENST00000343090 HMGXB4Q9UGU5 601 aa8.1□□□□□ -1.11
UBE4B-202ENST00000343090 CACNA1FO60840 1977 aa8.1□□□□□ -1.11
UBE4B-202ENST00000343090 NT5C1B-RDH14C9J2C7 533 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 RNASEH1O60930 286 aaKnown RBP8.09□□□□□ -1.11
UBE4B-202ENST00000343090 ALOX12P18054 663 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 SLC7A2P52569 658 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 KLF10Q13118 480 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 ACOX1Q15067 660 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 SFT2D3Q587I9 215 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 OR52E8Q6IFG1 317 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 DOK6Q6PKX4 331 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 GCNT7Q6ZNI0 430 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 PIWIL4Q7Z3Z4 852 aaKnown RBP8.09□□□□□ -1.11
UBE4B-202ENST00000343090 PDSS2Q86YH6 399 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 PHACTR4Q8IZ21 702 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 FAM9CQ8IZT9 166 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 ARRDC4Q8NCT1 418 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 SPATA22Q8NHS9 363 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 SNED1Q8TER0 1413 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 CLEC4CQ8WTT0 213 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 RSPH1Q8WYR4 309 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 CDK5RAP1Q96SZ6 601 aaKnown RBP8.09□□□□□ -1.11
UBE4B-202ENST00000343090 SLC17A6Q9P2U8 582 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 ZNHIT2Q9UHR6 403 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 C9JVG2 144 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 H3BNX3 289 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 SIN3BO75182 1162 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 OR56A5P0C7T3 313 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 SOX6P35712 828 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 HK2P52789 917 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 RPL38P63173 70 aaKnown RBP8.09□□□□□ -1.11
UBE4B-202ENST00000343090 JAG1P78504 1218 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 DLG2Q15700 870 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 MTX3Q5HYI7 312 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 TRMT10BQ6PF06 316 aaKnown RBP8.09□□□□□ -1.11
UBE4B-202ENST00000343090 DLK2Q6UY11 383 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 TMEM192Q8IY95 271 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 TMEM132CQ8N3T6 1108 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 OR6K2Q8NGY2 324 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 MCOLN3Q8TDD5 553 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 RORBQ92753 470 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 NXNL1Q96CM4 212 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 PANX3Q96QZ0 392 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 NIFKQ9BYG3 293 aaKnown RBP8.09□□□□□ -1.11
UBE4B-202ENST00000343090 FAM126AQ9BYI3 521 aaPredicted RBP8.09□□□□□ -1.11
UBE4B-202ENST00000343090 SDCBP2Q9H190 292 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 SQORQ9Y6N5 450 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 PDLIM1O00151 329 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 TSPAN1O60635 241 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 MTA2O94776 668 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 KCNH1O95259 989 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 TGDSO95455 350 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 IGSF6O95976 241 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 ZNF135P52742 658 aaPredicted RBP8.09□□□□□ -1.11
UBE4B-202ENST00000343090 LSM3P62310 102 aaKnown RBP8.09□□□□□ -1.11
UBE4B-202ENST00000343090 MPP1Q00013 466 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 MBTD1Q05BQ5 628 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 PSMD5Q16401 504 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 FGD3Q5JSP0 725 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 PLEKHM3Q6ZWE6 761 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 CAMK1DQ8IU85 385 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 BPIFB6Q8NFQ5 453 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 PSMA8Q8TAA3 256 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 SELENOMQ8WWX9 145 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 PHF21AQ96BD5 680 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 ASB2Q96Q27 587 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 TMEM106CQ9BVX2 250 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 PRDM16Q9HAZ2 1276 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 PCDHGC3Q9UN70 934 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 XRN1Q8IZH2 1706 aaKnown RBP8.09□□□□□ -1.11
UBE4B-202ENST00000343090 TCRBV7S3A2A0A539 114 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 TMEM63AO94886 807 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 PCDH8O95206 1070 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 TFPTP0C1Z6 253 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 COX7A2P14406 83 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 CYP2C18P33260 490 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 ST13P50502 369 aaKnown RBP8.09□□□□□ -1.11
UBE4B-202ENST00000343090 PTP4A2Q12974 167 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 ZNF460Q14592 562 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 TYW3Q6IPR3 259 aaKnown RBP8.09□□□□□ -1.11
UBE4B-202ENST00000343090 RHBDF2Q6PJF5 856 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 CUZD1Q86UP6 607 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 TRIM48Q8IWZ4 208 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 C10orf53Q8N6V4 93 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 POC5Q8NA72 575 aa8.09□□□□□ -1.11
UBE4B-202ENST00000343090 PPTC7Q8NI37 304 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms