RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 TULP3O75386 442 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 RNASEH2AO75792 299 aaKnown RBP11.79□□□□□ -0.52
C2orf88-201ENST00000340623 MT-CO1P00395 513 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 NMBRP28336 390 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 RGS4P49798 205 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 SERPINB8P50452 374 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 ARFIP2P53365 341 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 UBXN2BQ14CS0 331 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 TCEA2Q15560 299 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 SETMARQ53H47 684 aaPredicted RBP11.79□□□□□ -0.52
C2orf88-201ENST00000340623 FAM78AQ5JUQ0 283 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 FAM46CQ5VWP2 391 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 TTC23LQ6PF05 361 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 TRMT10BQ6PF06 316 aaKnown RBP11.79□□□□□ -0.52
C2orf88-201ENST00000340623 CXorf40AQ8TE69 158 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 MYLIPQ8WY64 445 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 WBP2Q969T9 261 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 DNAJC1Q96KC8 554 aaKnown RBP11.79□□□□□ -0.52
C2orf88-201ENST00000340623 WRAP53Q9BUR4 548 aaKnown RBP11.79□□□□□ -0.52
C2orf88-201ENST00000340623 UTP6Q9NYH9 597 aaKnown RBP11.79□□□□□ -0.52
C2orf88-201ENST00000340623 PKD2L2Q9NZM6 624 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 ARL2BPQ9Y2Y0 163 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 CFLARO15519 480 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 ELFN1P0C7U0 828 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 SFSWAPQ12872 951 aaKnown RBP11.79□□□□□ -0.52
C2orf88-201ENST00000340623 SLC5A9Q2M3M2 681 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 CARD16Q5EG05 197 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 E2F7Q96AV8 911 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 OXNAD1Q96HP4 312 aaPredicted RBP11.79□□□□□ -0.52
C2orf88-201ENST00000340623 NECTIN4Q96NY8 510 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 TRIM54Q9BYV2 358 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 SLC40A1Q9NP59 571 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 CACNA2D2Q9NY47 1150 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 GRID1Q9ULK0 1009 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 ACOT9Q9Y305 439 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 IRAK3Q9Y616 596 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 LINC01565O15544 149 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 CIB2O75838 187 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 FAM155BO75949 473 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 LATS1O95835 1130 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 DNTTP04053 509 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 ALPIP09923 528 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 MC4RP32245 332 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 CCR2P41597 374 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 IRX1P78414 480 aaPredicted RBP11.79□□□□□ -0.52
C2orf88-201ENST00000340623 SKOR1P84550 965 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 GRSF1Q12849 480 aaKnown RBP eCLIP11.79□□□□□ -0.52
C2orf88-201ENST00000340623 SLC12A1Q13621 1099 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 RUNX3Q13761 415 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 KCNJ11Q14654 390 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 RPS6KA2Q15349 733 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 MSS51Q4VC12 460 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 ARSIQ5FYB1 569 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 FSCBQ5H9T9 825 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 C22orf39Q6P5X5 142 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 TRIM67Q6ZTA4 783 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 MARK2Q7KZI7 788 aaKnown RBP11.79□□□□□ -0.52
C2orf88-201ENST00000340623 NPAS3Q8IXF0 933 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 CPNE1Q99829 537 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 ELOVL2Q9NXB9 296 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 GDE1Q9NZC3 331 aa11.79□□□□□ -0.52
C2orf88-201ENST00000340623 A0A1W2PPM1 405 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 GYG2O15488 501 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 MAP3K13O43283 966 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 DIAPH2O60879 1101 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 SMIM24O75264 130 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 PRNPP04156 253 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 ASLP04424 464 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 DLDP09622 509 aaKnown RBP11.78□□□□□ -0.52
C2orf88-201ENST00000340623 FAM83EQ2M2I3 478 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 THEMIS2Q5TEJ8 643 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 HTR3DQ70Z44 454 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 RD3Q7Z3Z2 195 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 MMAAQ8IVH4 418 aaKnown RBP11.78□□□□□ -0.52
C2orf88-201ENST00000340623 ZNF513Q8N8E2 541 aaPredicted RBP11.78□□□□□ -0.52
C2orf88-201ENST00000340623 DTX3LQ8TDB6 740 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 CCDC124Q96CT7 223 aaKnown RBP11.78□□□□□ -0.52
C2orf88-201ENST00000340623 IL21Q9HBE4 155 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 HAO1Q9UJM8 370 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 PHTF1Q9UMS5 762 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 RUVBL2Q9Y230 463 aaKnown RBP11.78□□□□□ -0.52
C2orf88-201ENST00000340623 ARIH1Q9Y4X5 557 aaPredicted RBP11.78□□□□□ -0.52
C2orf88-201ENST00000340623 NUP205Q92621 2012 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.78□□□□□ -0.52
C2orf88-201ENST00000340623 A0A096LPK6 155 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 GPC4O75487 556 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 ZNF7P17097 686 aaPredicted RBP11.78□□□□□ -0.52
C2orf88-201ENST00000340623 MSH3P20585 1137 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 SGSHP51688 502 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 BOP1Q14137 746 aaKnown RBP11.78□□□□□ -0.52
C2orf88-201ENST00000340623 LILRA6Q6PI73 481 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 RTL10Q7L3V2 364 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 DET1Q7L5Y6 550 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 CRLF3Q8IUI8 442 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 ARHGAP12Q8IWW6 846 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 UNC5BQ8IZJ1 945 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 CNTD1Q8N815 330 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 PPFIBP2Q8ND30 876 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 MTBPQ96DY7 904 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms