RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 BMT2Q1RMZ1 405 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 GPR65Q8IYL9 337 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 ALG9Q9H6U8 611 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 FAM237BA0A1B0GVD1 139 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 PNPLA4P41247 253 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 PDX1P52945 283 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 PLA2G4EQ3MJ16 856 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 AAGABQ6PD74 315 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 ACTL9Q8TC94 416 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 NXNL1Q96CM4 212 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 SNTG1Q9NSN8 517 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 TBX20Q9UMR3 447 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 PCDHA3Q9Y5H8 950 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 ZNF780BQ9Y6R6 833 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 PLEKHG2Q9H7P9 1386 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 FAM86C2PA6NEL3 165 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 PEX11AO75192 247 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 FTH1P02794 183 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 PGAM2P15259 253 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 HOXC12P31275 282 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 SYNE4Q8N205 404 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 SPATA20Q8TB22 786 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 NELL1Q92832 810 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 PANX1Q96RD7 426 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 ALDH8A1Q9H2A2 487 aaPredicted RBP12.88□□□□□ -0.35
USP47-202ENST00000339865 PCDH9Q9HC56 1237 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 BSDC1Q9NW68 430 aaPredicted RBP12.88□□□□□ -0.35
USP47-202ENST00000339865 ADGRE2Q9UHX3 823 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 GTF3C4Q9UKN8 822 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 EVPLQ92817 2033 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 XKRYO14609 159 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 CYP1A1P04798 512 aaPredicted RBP12.88□□□□□ -0.35
USP47-202ENST00000339865 KCNA5P22460 613 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 RPL14P50914 215 aaKnown RBP12.88□□□□□ -0.35
USP47-202ENST00000339865 ALG10Q5BKT4 473 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 FSTL5Q8N475 847 aaPredicted RBP12.88□□□□□ -0.35
USP47-202ENST00000339865 IRGMA1A4Y4 181 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 KCNA6P17658 529 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 NR2C2P49116 596 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 NDUFV1P49821 464 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 CCNG2Q16589 344 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 SNX20Q7Z614 316 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 OR10H5Q8NGA6 315 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 TAMM41Q96BW9 452 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 PANX3Q96QZ0 392 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 TTLL2Q9BWV7 592 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 RASGRP1O95267 797 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 SLC7A2P52569 658 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 PTENP60484 403 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 CSTF1Q05048 431 aaKnown RBP12.88□□□□□ -0.35
USP47-202ENST00000339865 FAAP100Q0VG06 881 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 MTMR2Q13614 643 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 BLMHQ13867 455 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 GNASQ5JWF2 1037 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 CFAP97Q9P2B7 532 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 CYB561D2O14569 222 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 RFXANKO14593 260 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 UGT2B17O75795 530 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 NAMPTP43490 491 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 TPTEP56180 551 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 ZNF844Q08AG5 666 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 GHDCQ8N2G8 530 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 PIWIL2Q8TC59 973 aaKnown RBP12.87□□□□□ -0.35
USP47-202ENST00000339865 ZFP3Q96NJ6 502 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 QRFPRQ96P65 431 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 TEFMQ96QE5 360 aaKnown RBP12.87□□□□□ -0.35
USP47-202ENST00000339865 RNF38Q9H0F5 515 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 SLC12A8A0AV02 714 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 REM1O75628 298 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 ACTR3P61158 418 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 ABCA11PQ4W5N1 156 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 PITRM1Q5JRX3 1037 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 RNF220Q5VTB9 566 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 RAP1GAP2Q684P5 730 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 HAGHLQ6PII5 290 aaPredicted RBP12.87□□□□□ -0.35
USP47-202ENST00000339865 JSRP1Q96MG2 331 aaPredicted RBP12.87□□□□□ -0.35
USP47-202ENST00000339865 CDHR5Q9HBB8 845 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 CDH17Q12864 832 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 CRY1Q16526 586 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 SCIMPQ6UWF3 145 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 KIAA1324Q6UXG2 1013 aaKnown RBP12.87□□□□□ -0.35
USP47-202ENST00000339865 CEP76Q8TAP6 659 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 CCNB1IP1Q9NPC3 277 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 TUBG2Q9NRH3 451 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 PRMT7Q9NVM4 692 aaPredicted RBP12.87□□□□□ -0.35
USP47-202ENST00000339865 LEF1Q9UJU2 399 aaPredicted RBP12.87□□□□□ -0.35
USP47-202ENST00000339865 AMD1P17707 334 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 ZNF267Q14586 743 aaPredicted RBP12.87□□□□□ -0.35
USP47-202ENST00000339865 ATP13A4Q4VNC1 1196 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 NYAP1Q6ZVC0 841 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 ADGRF2Q8IZF7 708 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 CD300LFQ8TDQ1 290 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 DCP1AQ9NPI6 582 aaPredicted RBP12.87□□□□□ -0.35
USP47-202ENST00000339865 MALT1Q9UDY8 824 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 MEMO1Q9Y316 297 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 DAGLAQ9Y4D2 1042 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 PER2O15055 1255 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 NUAK1O60285 661 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 TFPIP10646 304 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 SLC9A3P48764 834 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms